RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	ACSM2A	Q08AH3	577 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	GRSF1	Q12849	480 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	GRIK2	Q13002	908 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	AIMP2	Q13155	320 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	WDR78	Q5VTH9	848 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	ACSM2B	Q68CK6	577 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	PMS2CL	Q68D20	193 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	KIAA0930	Q6ICG6	404 aa	Predicted RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	RHBDF2	Q6PJF5	856 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	CFAP77	Q6ZQR2	320 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	CREB3L2	Q70SY1	520 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	RBM23	Q86U06	439 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TSPAN33	Q86UF1	283 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	ADGRF2	Q8IZF7	708 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	BEST3	Q8N1M1	668 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	SRBD1	Q8N5C6	995 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	PCDH20	Q8N6Y1	951 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	SPATA22	Q8NHS9	363 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	RHBDF1	Q96CC6	855 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	ORAI1	Q96D31	301 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	FAM120B	Q96EK7	910 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	NCAPG	Q9BPX3	1015 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TM6SF1	Q9BZW5	370 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	GAREM1	Q9H706	876 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	PCDH9	Q9HC56	1237 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	HAUS2	Q9NVX0	235 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	FBXL17	Q9UF56	701 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	VPS28	Q9UK41	221 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	FBXW11	Q9UKB1	542 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	GPR34	Q9UPC5	381 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	R3HDM2	Q9Y2K5	976 aa	Known RBP	4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	TAF1	P21675	1872 aa		4.21	□□□□□ -1.74
RAP1B-231	ENST00000544639	IGKV2D-30	A0A075B6S6	120 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639		M0QZ24	198 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	SLC28A2	O43868	658 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	GFPT2	O94808	682 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	KDM4B	O94953	1096 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	CLDN14	O95500	239 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PPP1R3D	O95685	299 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	RB1	P06400	928 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	CLTB	P09497	229 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	LINC00271	P0C7V0	271 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	TMEM11	P17152	192 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	ALOX12	P18054	663 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	ACADL	P28330	430 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	HOXA13	P31271	388 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PRCP	P42785	496 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PEX5	P50542	639 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	NLRP5	P59047	1200 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	MC1R	Q01726	317 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	FOXM1	Q08050	763 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	ZNF155	Q12901	538 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	DLG1	Q12959	904 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PRKG2	Q13237	762 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	IRF3	Q14653	427 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PNLIPRP3	Q17RR3	467 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	DUSP28	Q4G0W2	176 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	DUS1L	Q6P1R4	473 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	FAM122C	Q6P4D5	195 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	CCNI2	Q6ZMN8	369 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	CLEC17A	Q6ZS10	378 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	SZRD1	Q7Z422	152 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	NRROS	Q86YC3	692 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	HACE1	Q8IYU2	909 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	HJURP	Q8NCD3	748 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	MAGEC3	Q8TD91	643 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	APBB2	Q92870	758 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	NSUN4	Q96CB9	384 aa	Known RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	EGLN2	Q96KS0	407 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	C3orf30	Q96M34	536 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	OR2A14	Q96R47	310 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	PIGM	Q9H3S5	423 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	MAGIX	Q9H6Y5	334 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	MTMR10	Q9NXD2	777 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	MCM9	Q9NXL9	1143 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	NSMCE4A	Q9NXX6	385 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	SMARCAL1	Q9NZC9	954 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	ZNF224	Q9NZL3	707 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	OGFR	Q9NZT2	677 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	COPG2	Q9UBF2	871 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	UBA2	Q9UBT2	640 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	OR14J1	Q9UGF5	321 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	SIX4	Q9UIU6	781 aa		4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	FBXO2	Q9UK22	296 aa	Predicted RBP	4.2	□□□□□ -1.74
RAP1B-231	ENST00000544639	KAT6B	Q8WYB5	2073 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	KANSL1L	A0AUZ9	987 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	MID1	O15344	667 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	SPINT2	O43291	252 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	HS6ST1	O60243	411 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	PMS2P2	O95744	297 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	ICAM1	P05362	532 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	SRPRA	P08240	638 aa	Known RBP	4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	APOBEC1	P41238	236 aa	Known RBP	4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	CAMP	P49913	170 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	TAS2R38	P59533	333 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	LRMP	Q12912	555 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	ACVR2B	Q13705	512 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	TNFAIP1	Q13829	316 aa		4.19	□□□□□ -1.74
RAP1B-231	ENST00000544639	KEAP1	Q14145	624 aa		4.19	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms