RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 IGSF5Q9NSI5 407 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CHCHD3Q9NX63 227 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 IL36AQ9UHA7 158 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 APPL1Q9UKG1 709 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 RUVBL2Q9Y230 463 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 CRYL1Q9Y2S2 319 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 COMMD10Q9Y6G5 202 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 PRRT4C9JH25 899 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ECI2O75521 394 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CLDN7O95471 211 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SERPINE1P05121 402 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 TROVE2P10155 538 aaKnown RBP eCLIP9.29□□□□□ -0.92
GNE-206ENST00000543356 LAMP2P13473 410 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PSMC3P17980 439 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CD9P21926 228 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 GRK2P25098 689 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SPAM1P38567 509 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 DLG1Q12959 904 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 STX3Q13277 289 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 RUNX3Q13761 415 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 COL19A1Q14993 1142 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 FAM83EQ2M2I3 478 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 ZRANB3Q5FWF4 1079 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CES4AQ5XG92 561 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CRTC1Q6UUV9 634 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 CERS6Q6ZMG9 384 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 YTHDF3Q7Z739 585 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 C10orf107Q8IVU9 208 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PIANPQ8IYJ0 282 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 STK40Q8N2I9 435 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 TMEM151AQ8N4L1 468 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SREK1Q8WXA9 508 aaKnown RBP9.29□□□□□ -0.92
GNE-206ENST00000543356 MYLIPQ8WY64 445 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 UBXN10Q96LJ8 280 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 KLHL32Q96NJ5 620 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 PLA2G2FQ9BZM2 168 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 GPAMQ9HCL2 828 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 DKK3Q9UBP4 350 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 SLC30A1Q9Y6M5 507 aa9.29□□□□□ -0.92
GNE-206ENST00000543356 TARM1B6A8C7 271 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 GAPDHSO14556 408 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 SRP72O76094 671 aaKnown RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 FSBPO95073 299 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 LTA4HP09960 611 aaKnown RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 MYL2P10916 166 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 BPIP17213 487 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 NFKBIAP25963 317 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 OPRD1P41143 372 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 PTGER3P43115 390 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 PGGT1BP53609 377 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TIAL1Q01085 375 aaKnown RBP eCLIP9.28□□□□□ -0.92
GNE-206ENST00000543356 KDSRQ06136 332 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 AGAP9Q5VTM2 703 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 LYPLAL1Q5VWZ2 237 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 ZDHHC20Q5W0Z9 365 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 SNX20Q7Z614 316 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TNS4Q8IZW8 715 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 FSTL5Q8N475 847 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 PNPLA1Q8N8W4 532 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TERB1Q8NA31 727 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 PPP1R14CQ8TAE6 165 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 HEXDCQ8WVB3 486 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 NXNL1Q96CM4 212 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 SCYL1Q96KG9 808 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 MSLNLQ96KJ4 702 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 MRPL57Q9BQC6 102 aaKnown RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 MRPL46Q9H2W6 279 aaKnown RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 BRD9Q9H8M2 597 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 THAP1Q9NVV9 213 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 PLA2G4CQ9UP65 541 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 DOCK8Q8NF50 2099 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TRBV5-4A0A0C4DH59 114 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 GLYATL1P3A0A0U1RQE8 302 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 A0A0U1RQS6 177 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 UBA6A0AVT1 1052 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 TK2O00142 265 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 LEFTY1O75610 366 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 PRAMEF1O95521 474 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 CTSLP07711 333 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 SBK3P0C264 359 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 RALBP11234 206 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 CYP2A6P11509 494 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 ZNF30P17039 623 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 ITGALP20701 1170 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 GJA4P35212 333 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 CDKN1CP49918 316 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 DLX2Q07687 328 aaPredicted RBP9.28□□□□□ -0.92
GNE-206ENST00000543356 GRM2Q14416 872 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TECRLQ5HYJ1 363 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 LRRC66Q68CR7 880 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 KLC3Q6P597 504 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TSPAN33Q86UF1 283 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 C10orf82Q8WW14 230 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 KXD1Q9BQD3 176 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 TRIM55Q9BYV6 548 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 P2RY12Q9H244 342 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 CCDC68Q9H2F9 335 aa9.28□□□□□ -0.92
GNE-206ENST00000543356 FAM96AQ9H5X1 160 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms