RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 PLK5Q496M5 336 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 MAP9Q49MG5 647 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 EMBQ6PCB8 327 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 C3orf62Q6ZUJ4 267 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SLC41A1Q8IVJ1 513 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 GABPB2Q8TAK5 448 aaPredicted RBP22.99■■□□□ 1.27
HOMER3-205ENST00000542541 GSDMBQ8TAX9 411 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 ZNF398Q8TD17 642 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SERAC1Q96JX3 654 aa22.99■■□□□ 1.27
HOMER3-205ENST00000542541 SUDS3Q9H7L9 328 aaPredicted RBP22.99■■□□□ 1.27
HOMER3-205ENST00000542541 CCDC162PA2VCL2 907 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 TEAD1P28347 426 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 GPR1P46091 355 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 CACNG1Q06432 222 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 PEX6Q13608 980 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 FRG1Q14331 258 aaKnown RBP22.98■■□□□ 1.27
HOMER3-205ENST00000542541 STAT4Q14765 748 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 IRF4Q15306 451 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 CHRNA6Q15825 494 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 GPR33Q49SQ1 333 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 RAET1GQ6H3X3 334 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 PNCKQ6P2M8 343 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 TRMT10CQ7L0Y3 403 aaKnown RBP22.98■■□□□ 1.27
HOMER3-205ENST00000542541 OR4L1Q8NH43 312 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 FAM174AQ8TBP5 190 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 DNASE2BQ8WZ79 361 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 EBF2Q9HAK2 575 aa22.98■■□□□ 1.27
HOMER3-205ENST00000542541 MBNL1Q9NR56 388 aaKnown RBP22.98■■□□□ 1.27
HOMER3-205ENST00000542541 EIF2B4Q9UI10 523 aaKnown RBP22.98■■□□□ 1.27
HOMER3-205ENST00000542541 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.98■■□□□ 1.27
HOMER3-205ENST00000542541 RAD51BO15315 384 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 GOT2P00505 430 aaKnown RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 PCCBP05166 539 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 PHBP35232 272 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 DHPSP49366 369 aaPredicted RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 KYNUQ16719 465 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 LYSMD4Q5XG99 296 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 SNX20Q7Z614 316 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 RGL4Q8IZJ4 473 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 CDC42EP4Q9H3Q1 356 aaKnown RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 ASB8Q9H765 288 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 LRRC4CQ9HCJ2 640 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 FZD3Q9NPG1 666 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 C20orf96Q9NUD7 363 aaPredicted RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 ERLIN1O75477 346 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 ARCN1P48444 511 aaKnown RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 PMS2P54278 862 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 NFATC2Q13469 925 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 THOC5Q13769 683 aaKnown RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 INPP5AQ14642 412 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 FASTKD1Q53R41 847 aaKnown RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 ZRANB3Q5FWF4 1079 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 CYS1Q717R9 158 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 PTAR1Q7Z6K3 402 aaPredicted RBP22.97■■□□□ 1.27
HOMER3-205ENST00000542541 LMNTD2Q8IXW0 634 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 TMEM145Q8NBT3 493 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 CALML6Q8TD86 181 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 TTC1Q99614 292 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 IRF2BPLQ9H1B7 796 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 VPS37BQ9H9H4 285 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 NINJ2Q9NZG7 142 aa22.97■■□□□ 1.27
HOMER3-205ENST00000542541 GAPDHSO14556 408 aaPredicted RBP22.96■■□□□ 1.27
HOMER3-205ENST00000542541 TOR1BO14657 336 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 SSTR1P30872 391 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 PTGER3P43115 390 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 MRNIPQ6NTE8 343 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 NEPROQ6NW34 567 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 ADAMTSL4Q6UY14 1074 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 AENQ8WTP8 325 aaKnown RBP22.96■■□□□ 1.27
HOMER3-205ENST00000542541 ULK4Q96C45 1275 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 CERS2Q96G23 380 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 AGAP2Q99490 1192 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 MYOCQ99972 504 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 ORAI3Q9BRQ5 295 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 SEMA4AQ9H3S1 761 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 PPANQ9NQ55 473 aaKnown RBP22.96■■□□□ 1.27
HOMER3-205ENST00000542541 CATSPERZQ9NTU4 200 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 CRLS1Q9UJA2 301 aa22.96■■□□□ 1.27
HOMER3-205ENST00000542541 ARNTP27540 789 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 IGFALSP35858 605 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 TRIM23P36406 574 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 PPARGP37231 505 aaPredicted RBP22.95■■□□□ 1.26
HOMER3-205ENST00000542541 RACK1P63244 317 aaKnown RBP22.95■■□□□ 1.26
HOMER3-205ENST00000542541 BRD3Q15059 726 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 ATP13A5Q4VNC0 1218 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 AARS2Q5JTZ9 985 aaKnown RBP22.95■■□□□ 1.26
HOMER3-205ENST00000542541 ZNF449Q6P9G9 518 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 PRR23BQ6ZRT6 265 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 CAPN12Q6ZSI9 719 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 ARMCX6Q7L4S7 300 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 TAS2R42Q7RTR8 314 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 SDCCAG8Q86SQ7 713 aaPredicted RBP22.95■■□□□ 1.26
HOMER3-205ENST00000542541 KCNMB4Q86W47 210 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 PLA2G15Q8NCC3 412 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 BTN2A2Q8WVV5 523 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 VPS35Q96QK1 796 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 TXLNGYQ9BZA5 131 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 MIR1-1HGQ9H1L0 117 aa22.95■■□□□ 1.26
HOMER3-205ENST00000542541 PLAC1Q9HBJ0 212 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms