RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 TSSK1BQ9BXA7 367 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 IL26Q9NPH9 171 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 IL36AQ9UHA7 158 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 STARD13Q9Y3M8 1113 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 WASF2Q9Y6W5 498 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 MYO9BQ13459 2157 aa10.98□□□□□ -0.65
SCG3-202ENST00000542355 A0A087X1B8 175 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 A0A1W2PQ67 120 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 KLF11O14901 512 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 OR1I1O60431 355 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 SRP72O76094 671 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 HLA-EP13747 358 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 BPIP17213 487 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 LHCGRP22888 699 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 OPRD1P41143 372 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 MTHFRP42898 656 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TTPAP49638 278 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PTSQ03393 145 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 BST1Q10588 318 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 OVGP1Q12889 678 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 ADGRE1Q14246 886 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 CSHL1Q14406 222 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PCLAFQ15004 111 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 FNDC3BQ53EP0 1204 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 CES4AQ5XG92 561 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 BRAT1Q6PJG6 821 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TTC7BQ86TV6 843 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PIM3Q86V86 326 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 MICALL1Q8N3F8 863 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 FSTL5Q8N475 847 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 ANKS4BQ8N8V4 417 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TERB1Q8NA31 727 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 LPGAT1Q92604 370 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 AARSD1Q9BTE6 412 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 TRMT61BQ9BVS5 477 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 TTYH1Q9H313 450 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 ZNF395Q9H8N7 513 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 EGFL7Q9UHF1 273 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 MTF2Q9Y483 593 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 USP15Q9Y4E8 981 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 SPTBN5Q9NRC6 3674 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 ANTXRLA6NF34 631 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TK2O00142 265 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PFDN6O15212 129 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PRAMEF1O95521 474 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 CCDC166P0CW27 439 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 CACNG1Q06432 222 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 STX3Q13277 289 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 EIF4HQ15056 248 aaKnown RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 ATG16L1Q676U5 607 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 LRRC8EQ6NSJ5 796 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TMEM207Q6UWW9 146 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 LCA5Q86VQ0 697 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 PHTF2Q8N3S3 785 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 TMEM151AQ8N4L1 468 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 HEXDCQ8WVB3 486 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 MSLNLQ96KJ4 702 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 GPR78Q96P69 363 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 MCCC1Q96RQ3 725 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 CCDC68Q9H2F9 335 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 ASB8Q9H765 288 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 ZDHHC4Q9NPG8 344 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 B4GALT6Q9UBX8 382 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 APPL1Q9UKG1 709 aa10.97□□□□□ -0.65
SCG3-202ENST00000542355 CORO1CQ9ULV4 474 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 NUP210Q8TEM1 1887 aaPredicted RBP10.97□□□□□ -0.65
SCG3-202ENST00000542355 GLYATL1P3A0A0U1RQE8 302 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 G3V2L1 256 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 UGT1A6P19224 532 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 UGT1A1P22309 533 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 UGT1A4P22310 534 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 FDXRP22570 491 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 UGT1A3P35503 534 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 UGT1A5P35504 534 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 TIAL1Q01085 375 aaKnown RBP eCLIP10.96□□□□□ -0.65
SCG3-202ENST00000542355 ILF2Q12905 390 aaKnown RBP10.96□□□□□ -0.65
SCG3-202ENST00000542355 IFT88Q13099 833 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 ITGA9Q13797 1035 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 ZNF234Q14588 700 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 FAM83EQ2M2I3 478 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 ZNF805Q5CZA5 627 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 AARS2Q5JTZ9 985 aaKnown RBP10.96□□□□□ -0.65
SCG3-202ENST00000542355 RFLNAQ6ZTI6 216 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 STK40Q8N2I9 435 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 ANKRD49Q8WVL7 239 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.65
SCG3-202ENST00000542355 CHFRQ96EP1 664 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 BIRC8Q96P09 236 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 OSBPL1AQ9BXW6 950 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 C20orf27Q9GZN8 174 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.96□□□□□ -0.65
SCG3-202ENST00000542355 XPR1Q9UBH6 696 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 FAM50BQ9Y247 325 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 VPS9D1Q9Y2B5 631 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 NUMBLQ9Y6R0 609 aa10.96□□□□□ -0.65
SCG3-202ENST00000542355 GAPDHSO14556 408 aaPredicted RBP10.96□□□□□ -0.66
SCG3-202ENST00000542355 ECI2O75521 394 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 RHOBTB1O94844 696 aa10.96□□□□□ -0.66
SCG3-202ENST00000542355 KAT7O95251 611 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms