RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 LZTR1Q8N653 840 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 AGBL5Q8NDL9 886 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 AP2M1Q96CW1 435 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 DDA1Q9BW61 102 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 CDH19Q9H159 772 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 PILRAQ9UKJ1 303 aa15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 CNOT6Q9ULM6 557 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 ZNF106Q9H2Y7 1883 aaKnown RBP15.37■□□□□ 0.05
CLSTN3-213ENST00000541953 LOC101059948A0A1B0GTJ6 334 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 A8MU76 341 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 DNAJC6O75061 913 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 PRLP01236 227 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 ATP1A1P05023 1023 aaKnown RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 PRKAR1AP10644 381 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 DESP17661 470 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 CSTF2P33240 577 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 PCK1P35558 622 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 FASLGP48023 281 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 ATP1A2P50993 1020 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 STC1P52823 247 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 DSC2Q02487 901 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 KCNAB2Q13303 367 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 BIRC2Q13490 618 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 TRA2AQ13595 282 aaKnown RBP eCLIP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 CLPPQ16740 277 aaPredicted RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 TMEM71Q6P5X7 295 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 BORAQ6PGQ7 559 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 SFRP1Q8N474 314 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 TEX26Q8N6G2 289 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 ANKRD20A12PQ8NF67 263 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 RTP4Q96DX8 246 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 RIOK2Q9BVS4 552 aaKnown RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 RTN4Q9NQC3 1192 aaKnown RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 AKAP7Q9P0M2 348 aaPredicted RBP15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 PDP2Q9P2J9 529 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 TBC1D29Q9UFV1 150 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 MYO6Q9UM54 1294 aa15.36■□□□□ 0.05
CLSTN3-213ENST00000541953 A0A0J9YYE9 177 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 A6NCN8 305 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 FADS2P1A8MWK0 482 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 B4E171 279 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 TRBC1P01850 177 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 GZMAP12544 262 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 OAS2P29728 719 aaKnown RBP15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 ARL4AP40617 200 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 TSPAN7P41732 249 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 PRKCIP41743 596 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 IGFBP7Q16270 282 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 MARC1Q5VT66 337 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 SASS6Q6UVJ0 657 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 USP45Q70EL2 814 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 ARHGAP22Q7Z5H3 698 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 ZNF564Q8TBZ8 553 aaPredicted RBP15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 ARFGAP3Q9NP61 516 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 KCNK6Q9Y257 313 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 CHKBQ9Y259 395 aa15.35■□□□□ 0.05
CLSTN3-213ENST00000541953 A0A1W2PQ67 120 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 CLDN7O95471 211 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 CCDC172P0C7W6 258 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ZNF135P52742 658 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 CDH6P55285 790 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 NIPAL4Q0D2K0 466 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 NFATC2Q13469 925 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ATP13A4Q4VNC1 1196 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ZNF648Q5T619 568 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 GALNT13Q8IUC8 556 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 NRSN1Q8IZ57 195 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ARRDC2Q8TBH0 407 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 NAP1L5Q96NT1 182 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 TBC1D10AQ9BXI6 508 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ZMYND15Q9H091 742 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 BRD8Q9H0E9 1235 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ISCUQ9H1K1 167 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 ZNF71Q9NQZ8 489 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 DTLQ9NZJ0 730 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 AIPL1Q9NZN9 384 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 KLHL3Q9UH77 587 aa15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 MRPS18BQ9Y676 258 aaKnown RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 USP9XQ93008 2570 aaPredicted RBP15.34■□□□□ 0.05
CLSTN3-213ENST00000541953 HLA-DQB2P05538 268 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 SFTPCP11686 197 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 F8A1P23610 371 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 ARSEP51690 589 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 GPLD1P80108 840 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 HHEXQ03014 270 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 DCAF12Q5T6F0 453 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 HGSNATQ68CP4 663 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 NCBP2-AS2Q69YL0 99 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 ALG1LQ6GMV1 187 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 ZNF765Q7L2R6 523 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 CHST15Q7LFX5 561 aaPredicted RBP15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 EID2BQ96D98 161 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 SLC45A3Q96JT2 553 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 SLC38A3Q99624 504 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 TDRD1Q9BXT4 1180 aaKnown RBP15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 THAP2Q9H0W7 228 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 ADNPQ9H2P0 1102 aa15.33■□□□□ 0.04
CLSTN3-213ENST00000541953 KCTD5Q9NXV2 234 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms