RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 BUB1BO60566 1050 aaPredicted RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 SRGAP2O75044 1071 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 ERLIN1O75477 346 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 PIGNO95427 931 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 POP4O95707 220 aaKnown RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 GNA14O95837 355 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 TUBBP07437 444 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CTAGE8P0CG41 777 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 SLC2A3P11169 496 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 TFE3P19532 575 aaPredicted RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 XPAP23025 273 aaPredicted RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 NR2F2P24468 414 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 PTGER4P35408 488 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 ARHGAP25P42331 645 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 POLD2P49005 469 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 SEPHS1P49903 392 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 KIAA1024LP59773 190 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CTBSQ01459 385 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 SRSF11Q05519 484 aaKnown RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 BRD3Q15059 726 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 SPA17Q15506 151 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 MEA1Q16626 185 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 UGT8Q16880 541 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CCDC40Q4G0X9 1142 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CBWD6Q4V339 395 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CBWD3Q5JTY5 395 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CBWD5Q5RIA9 395 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CCDC122Q5T0U0 273 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 INTS8Q75QN2 995 aaKnown RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 SETD3Q86TU7 594 aaPredicted RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 CTAGE6Q86UF2 777 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 CTAGE4Q8IX94 777 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 NEK11Q8NG66 645 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 OR2AP1Q8NGE2 309 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 OR10G6Q8NH81 332 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 HMCESQ96FZ2 354 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 OR6C1Q96RD1 312 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 EIF3CQ99613 913 aaKnown RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 DPYSL5Q9BPU6 564 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 GSDMCQ9BYG8 508 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 TSGA10Q9BZW7 698 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 PCDH12Q9NPG4 1184 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 SIDT1Q9NXL6 827 aaKnown RBP9.72□□□□□ -0.85
CHFR-220ENST00000541817 KIAA1257Q9ULG3 409 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 GUCA1BQ9UMX6 200 aa9.72□□□□□ -0.85
CHFR-220ENST00000541817 PKDREJQ9NTG1 2253 aa9.71□□□□□ -0.85
CHFR-220ENST00000541817 A8MX80 341 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 TNFRSF10CO14798 259 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 FANCGO15287 622 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 SART1O43290 800 aaKnown RBP9.71□□□□□ -0.86
CHFR-220ENST00000541817 CALUO43852 315 aaPredicted RBP9.71□□□□□ -0.86
CHFR-220ENST00000541817 F9P00740 461 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 CD99P14209 185 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 BPIP17213 487 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 GTF2H1P32780 548 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 STAT1P42224 750 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 GPD2P43304 727 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 HDAC4P56524 1084 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 GPLD1P80108 840 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 FKBP3Q00688 224 aaKnown RBP9.71□□□□□ -0.86
CHFR-220ENST00000541817 CKAP4Q07065 602 aaKnown RBP9.71□□□□□ -0.86
CHFR-220ENST00000541817 SLC20A2Q08357 652 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 ILF3Q12906 894 aaKnown RBP eCLIP9.71□□□□□ -0.86
CHFR-220ENST00000541817 NFATC2Q13469 925 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 SMTNL2Q2TAL5 461 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 ARTNQ5T4W7 220 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 HGSNATQ68CP4 663 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 BEND5Q7L4P6 421 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 NXPE1Q8N323 547 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 ST6GALNAC3Q8NDV1 305 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 CCDC42Q96M95 316 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 CEP63Q96MT8 703 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 TKTL2Q9H0I9 626 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 NDST4Q9H3R1 872 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 NHEJ1Q9H9Q4 299 aaPredicted RBP9.71□□□□□ -0.86
CHFR-220ENST00000541817 ARFGAP3Q9NP61 516 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 LHX9Q9NQ69 397 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 FAM53CQ9NYF3 392 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 PADI1Q9ULC6 663 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 MYO6Q9UM54 1294 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 SUFUQ9UMX1 484 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 PCDHGA6Q9Y5G7 932 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 DOCK4Q8N1I0 1966 aa9.71□□□□□ -0.86
CHFR-220ENST00000541817 ZGRF1Q86YA3 2104 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 ILVBLA1L0T0 632 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 DRGXA6NNA5 263 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 MAPK13O15264 365 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 SPAG6O75602 509 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 CEACAM4O75871 244 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 RECQL5O94762 991 aaPredicted RBP9.7□□□□□ -0.86
CHFR-220ENST00000541817 TIAF1O95411 115 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 EML2O95834 649 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 PAEPP09466 180 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 KELP23276 732 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 HTR1EP28566 365 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 ACTR1BP42025 376 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 RPL34P49207 117 aaKnown RBP9.7□□□□□ -0.86
CHFR-220ENST00000541817 GFERP55789 205 aa9.7□□□□□ -0.86
CHFR-220ENST00000541817 ACTR1AP61163 376 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms