RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 KCNK1O00180 336 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 KRIT1O00522 736 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 NTN3O00634 580 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 PRAMEF10O60809 474 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ATP1A1P05023 1023 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 RBP3P10745 1247 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 GP1BBP13224 206 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 TCP1P17987 556 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ITGB7P26010 798 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 GKP32189 559 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SCNN1BP51168 640 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 EIF3EP60228 445 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 PFN3P60673 137 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 PPARDQ03181 441 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SKIDA1Q1XH10 827 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 TEX44Q53QW1 395 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ZNF805Q5CZA5 627 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LRRC73Q5JTD7 316 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 PAPD7Q5XG87 772 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SRLQ86TD4 932 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ZC3H18Q86VM9 953 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 HID1Q8IV36 788 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 CDKL3Q8IVW4 592 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 Q8N9G6 341 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 KYQ8NBH2 561 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 OR6K2Q8NGY2 324 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SLC35B2Q8TB61 432 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SCG3Q8WXD2 468 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SPOCK2Q92563 424 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 USP7Q93009 1102 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 EXOC2Q96KP1 924 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ZNF641Q96N77 438 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 TMEM74Q96NL1 305 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LENG8Q96PV6 779 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 WDR24Q96S15 920 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 KLF6Q99612 283 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 FERMT1Q9BQL6 677 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 POLR1EQ9GZS1 481 aaKnown RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LRRN3Q9H3W5 708 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 NT5MQ9NPB1 228 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 RBM22Q9NW64 420 aaKnown RBP eCLIP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 DKK3Q9UBP4 350 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 PNMA8BQ9ULN7 279 aaPredicted RBP8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 SNX12Q9UMY4 172 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ZKSCAN5Q9Y2L8 839 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 ANKRD36A6QL64 1941 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 HECTD1Q9ULT8 2610 aa8.71□□□□□ -1.02
CLSTN3-212ENST00000541770 LRP4O75096 1905 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 LRRK1Q38SD2 2015 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 A0A1W2PQ67 120 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 A0A1W2PQM1 296 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 TCRBV7S2A1N4TA0A589 114 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 TSPAN11A1L157 253 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 C16orf96A6NNT2 1141 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 H7C0C1 242 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 INSIG1O15503 277 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 HTRA2O43464 458 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 TSPAN6O43657 245 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 AP1G1O43747 822 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 CEP104O60308 925 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 SOCS5O75159 536 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 JCHAINP01591 159 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 FGGP02679 453 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 HLA-DQB2P05538 268 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 UGT2B4P06133 528 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 WT1P19544 449 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 PTPN3P26045 913 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 RBL1P28749 1068 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 SERPINA4P29622 427 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 CXCR5P32302 372 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 IGFALSP35858 605 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ETV5P41161 510 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ABL2P42684 1182 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ATP5OP48047 213 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 MAXP61244 160 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ETF1P62495 437 aaKnown RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 BCL2L1Q07817 233 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 WASHC5Q12768 1159 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ZBTB17Q13105 803 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 CLCA4Q14CN2 919 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ELOCQ15369 112 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 SIX1Q15475 284 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 SLC14A2Q15849 920 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 IGFBP7Q16270 282 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 PHF19Q5T6S3 580 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 DRICH1Q6PGQ1 229 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 BRAT1Q6PJG6 821 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 GDPD4Q6W3E5 623 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 CNTD1Q8N815 330 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ARL10Q8N8L6 244 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 DENND6BQ8NEG7 585 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ARRDC2Q8TBH0 407 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ACTRT1Q8TDG2 376 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 CXorf40AQ8TE69 158 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 HTR3CQ8WXA8 447 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 TSACCQ96A04 125 aaPredicted RBP8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 RAB7BQ96AH8 199 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 ECHDC3Q96DC8 303 aa8.7□□□□□ -1.02
CLSTN3-212ENST00000541770 TEKT5Q96M29 485 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms