RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 ZCCHC8Q6NZY4 707 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 GLT6D1Q7Z4J2 308 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 NLRP8Q86W28 1048 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 RAVER1Q8IY67 606 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 FSTL5Q8N475 847 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 GPR26Q8NDV2 337 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 SCG3Q8WXD2 468 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 APOLD1Q96LR9 279 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 PPP1R2P1Q96PQ5 205 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 SPATA16Q9BXB7 569 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 FRMD8Q9BZ67 464 aaPredicted RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 TMEM168Q9H0V1 697 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 TRABDQ9H4I3 376 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
SNHG1-215ENST00000540904 BPIFA1Q9NP55 256 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 ANGPTL2Q9UKU9 493 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 TMEM98Q9Y2Y6 226 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 DGKBQ9Y6T7 804 aa9.18□□□□□ -0.94
SNHG1-215ENST00000540904 USP27XA6NNY8 438 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 TPP1O14773 563 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 BUD23O43709 281 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 RFPL3O75679 317 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 METTL18O95568 372 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 ASMTLO95671 621 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 FUCA1P04066 466 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 ATP1A1P05023 1023 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CEACAM5P06731 702 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CKMT1AP12532 417 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 ADRA1AP35348 466 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 ACTN2P35609 894 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 HMGCLP35914 325 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 DCDC1P59894 354 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SHC2P98077 582 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SIX1Q15475 284 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CCNG2Q16589 344 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 P3H1Q32P28 736 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 DHRS13Q6UX07 377 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 RANBP10Q6VN20 620 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 MARK2Q7KZI7 788 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 TAF8Q7Z7C8 310 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 PRUNE1Q86TP1 453 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 GKN2Q86XP6 184 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SLC35F6Q8N357 371 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 TTC30BQ8N4P2 665 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CCDC89Q8N998 374 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 FAM181AQ8N9Y4 354 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CCL4L1Q8NHW4 92 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 MAIP1Q8WWC4 291 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 ADAMTS14Q8WXS8 1223 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 LRRC45Q96CN5 670 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 RTP4Q96DX8 246 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 COX14Q96I36 57 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 TBL1YQ9BQ87 522 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SCNM1Q9BWG6 230 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CDH19Q9H159 772 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 RAD18Q9NS91 495 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 HACD3Q9P035 362 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SIRPGQ9P1W8 387 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 GULP1Q9UBP9 304 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CNOT6Q9ULM6 557 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SUFUQ9UMX1 484 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 GPR34Q9UPC5 381 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SLC17A4Q9Y2C5 497 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 PKP3Q9Y446 797 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 PCDHGA1Q9Y5H4 931 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CNOT1A5YKK6 2376 aaKnown RBP9.17□□□□□ -0.94
SNHG1-215ENST00000540904 CABIN1Q9Y6J0 2220 aa9.17□□□□□ -0.94
SNHG1-215ENST00000540904 SPTBN2O15020 2390 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 LRRK1Q38SD2 2015 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 LY6G6EA0A0G2JKS1 128 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 CPED1A4D0V7 1026 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 DKK1O94907 266 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 SLC25A14O95258 325 aaPredicted RBP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 IVLP07476 585 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ETS1P14921 441 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ACP1P24666 158 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 MSNP26038 577 aaKnown RBP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 DUSP3P51452 185 aaPredicted RBP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 NR0B2Q15466 257 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 C6orf132Q5T0Z8 1188 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 KCTD11Q693B1 232 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 LVRNQ6Q4G3 990 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 GSTA5Q7RTV2 222 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 SLC35F3Q8IY50 421 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 SDR16C5Q8N3Y7 309 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 TRAM1L1Q8N609 369 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 PDCD7Q8N8D1 485 aaKnown RBP9.16□□□□□ -0.94
SNHG1-215ENST00000540904 FAM46DQ8NEK8 389 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 GLMNQ92990 594 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 MS4A14Q96JA4 679 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 PLEKHG4BQ96PX9 1271 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 OR2M4Q96R27 311 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ZSCAN5AQ9BUG6 496 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 BOCQ9BWV1 1114 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 LRRC40Q9H9A6 602 aa9.16□□□□□ -0.94
SNHG1-215ENST00000540904 ARFGAP3Q9NP61 516 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms