RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 TMCC1O94876 653 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 FGF19O95750 216 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 IGHA1P01876 353 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CHRNGP07510 517 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 COX4I1P13073 169 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 IMPDH1P20839 514 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 MPSTP25325 297 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CDC25CP30307 473 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CPOXP36551 454 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CLCN4P51793 760 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 ADARP55265 1226 aaKnown RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 WDR5P61964 334 aaKnown RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 SLC7A9P82251 487 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 FOXK2Q01167 660 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 BTKQ06187 659 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 KLF10Q13118 480 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CDH18Q13634 790 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 ZNF460Q14592 562 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 SLC9B1Q4ZJI4 515 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 RETSATQ6NUM9 610 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 NCEH1Q6PIU2 408 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 ATG14Q6ZNE5 492 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 FRMD7Q6ZUT3 714 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 HOMEZQ8IX15 550 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.12□□□□□ -0.79
LMO3-224ENST00000540848 ULK2Q8IYT8 1036 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 LSMEM2Q8N112 164 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 ELMOD1Q8N336 334 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 TMEM199Q8N511 208 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CCNYL1Q8N7R7 359 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 ZNF557Q8N988 423 aaPredicted RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 KDM1BQ8NB78 822 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 OR52K2Q8NGK3 314 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 CEP70Q8NHQ1 597 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 RP9Q8TA86 221 aaKnown RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 C1orf216Q8TAB5 229 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 EDARADDQ8WWZ3 215 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 JADE3Q92613 823 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.12□□□□□ -0.79
LMO3-224ENST00000540848 VWCEQ96DN2 955 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 RSRC1Q96IZ7 334 aaKnown RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 FAM161BQ96MY7 647 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 GCNAQ96QF7 691 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 NDNQ99608 321 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 DERL2Q9GZP9 239 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 GKN1Q9NS71 199 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 MARCH4Q9P2E8 410 aaPredicted RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 DNMT3BQ9UBC3 853 aaKnown RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 GDF2Q9UK05 429 aaPredicted RBP10.12□□□□□ -0.79
LMO3-224ENST00000540848 PCDHGC4Q9Y5F7 938 aa10.12□□□□□ -0.79
LMO3-224ENST00000540848 OBSL1O75147 1896 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 A0A1W2PNR3 127 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 LCHNA4D1U4 455 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 RGSL1A5PLK6 1076 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 SYCE1LA8MT33 242 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 CCNT2O60583 730 aaKnown RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 TBL1XO60907 577 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 FKBP6O75344 327 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 NDUFS3O75489 264 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 PRLP01236 227 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 F7P08709 466 aaPredicted RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 CTSAP10619 480 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 IRF1P10914 325 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ZNF37AP17032 561 aaPredicted RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 GNAZP19086 355 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 HDCP19113 662 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 INHBCP55103 352 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 CDKN2DP55273 166 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 HERVK_113P63132 956 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ARF5P84085 180 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 E2F5Q15329 346 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 MAPRE2Q15555 327 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 MPPE1Q53F39 396 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ZNF789Q5FWF6 425 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 UGT3A1Q6NUS8 523 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 AAGABQ6PD74 315 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 C16orf89Q6UX73 402 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 HTR3DQ70Z44 454 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 TMEM150AQ86TG1 271 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 NLRP8Q86W28 1048 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 NKAPQ8N5F7 415 aaKnown RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 ZDHHC1Q8WTX9 485 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 YME1L1Q96TA2 773 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 SERPINI1Q99574 410 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 FEM1AQ9BSK4 669 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ERVK-6Q9BXR3 956 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ZBP1Q9H171 429 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 MAGEE1Q9HCI5 957 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 STX18Q9P2W9 335 aaKnown RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 LHX3Q9UBR4 397 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 BCAP29Q9UHQ4 241 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ZDHHC2Q9UIJ5 367 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 VPS28Q9UK41 221 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 ANGPTL2Q9UKU9 493 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 PRPF19Q9UMS4 504 aaKnown RBP10.11□□□□□ -0.79
LMO3-224ENST00000540848 L3MBTL1Q9Y468 752 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 OR51B4Q9Y5P0 310 aa10.11□□□□□ -0.79
LMO3-224ENST00000540848 TRAV19A0A0A6YYK7 116 aa10.1□□□□□ -0.79
LMO3-224ENST00000540848 E9PBE3 544 aa10.1□□□□□ -0.79
LMO3-224ENST00000540848 STX7O15400 261 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms