RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 SLC6A18Q96N87 628 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 SERPINB12Q96P63 405 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 SLC17A9Q9BYT1 436 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 PCED1AQ9H1Q7 454 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 RRAGDQ9NQL2 400 aaPredicted RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 MBNL1Q9NR56 388 aaKnown RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 SUSD2Q9UGT4 822 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 EIF2B4Q9UI10 523 aaKnown RBP16.66■□□□□ 0.26
UBC-208ENST00000540700 CD84Q9UIB8 345 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 MAST4O15021 2626 aa16.66■□□□□ 0.26
UBC-208ENST00000540700 PLXNA2O75051 1894 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 ESYT3A0FGR9 886 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 LDB2O43679 373 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 TM7SF2O76062 418 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 CA5AP35218 305 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 MAGEA3P43357 314 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 SESN2P58004 480 aaPredicted RBP16.65■□□□□ 0.26
UBC-208ENST00000540700 CDH17Q12864 832 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 POU6F1Q14863 301 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 WSCD2Q2TBF2 565 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 CCDC38Q502W7 563 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 WDR45BQ5MNZ6 344 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 CCDC70Q6NSX1 233 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 LAYNQ6UX15 382 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 LINC00523Q86TU6 105 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 NDUFAF2Q8N183 169 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 TMEM145Q8NBT3 493 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 PLA2G15Q8NCC3 412 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 MCUQ8NE86 351 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 DTD2Q96FN9 168 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 SNF8Q96H20 258 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 CRELD1Q96HD1 420 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 AGAP2Q99490 1192 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 TRIM56Q9BRZ2 755 aaKnown RBP16.65■□□□□ 0.26
UBC-208ENST00000540700 MIR1-1HGQ9H1L0 117 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 IL21RQ9HBE5 538 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 BPIFA1Q9NP55 256 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 PCOLCE2Q9UKZ9 415 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 DOCK9Q9BZ29 2069 aa16.65■□□□□ 0.26
UBC-208ENST00000540700 SCN8AQ9UQD0 1980 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 GOLGA4Q13439 2230 aaKnown RBP16.64■□□□□ 0.25
UBC-208ENST00000540700 MEI4A8MW99 385 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 H0Y8X5 98 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 K7ESM1 405 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 PSMD11O00231 422 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 LZTS3O60299 673 aaPredicted RBP16.64■□□□□ 0.25
UBC-208ENST00000540700 CBFA2T3O75081 653 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 BANF1O75531 89 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 SOD1P00441 154 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 WNT1P04628 370 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ZNF30P17039 623 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 BPIP17213 487 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 MGAT1P26572 445 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 CD27P26842 260 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 IGFALSP35858 605 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 SPINT3P49223 89 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ZNF140P52738 457 aaPredicted RBP16.64■□□□□ 0.25
UBC-208ENST00000540700 CLDN2P57739 230 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 CDK16Q00536 496 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 CYP4F3Q08477 520 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ARHGEF7Q14155 803 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ACOX1Q15067 660 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 AGERQ15109 404 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 IRF4Q15306 451 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 MSS51Q4VC12 460 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 FNBP1LQ5T0N5 605 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ZDHHC24Q6UX98 284 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 GCNT7Q6ZNI0 430 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 GLT6D1Q7Z4J2 308 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ZCCHC9Q8N567 271 aaKnown RBP16.64■□□□□ 0.25
UBC-208ENST00000540700 DNAAF3Q8N9W5 541 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 GPR26Q8NDV2 337 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 OR13C4Q8NGS5 318 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 BRSK1Q8TDC3 778 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ASB12Q8WXK4 309 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 SEC14L1Q92503 715 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 FOXJ1Q92949 421 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 SCAMP4Q969E2 229 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 CENPTQ96BT3 561 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 BMFQ96LC9 184 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ZNF778Q96MU6 729 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 WDR83Q9BRX9 315 aaKnown RBP16.64■□□□□ 0.25
UBC-208ENST00000540700 GPR63Q9BZJ6 419 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 ABCG8Q9H221 673 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 SYBUQ9NX95 663 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.64■□□□□ 0.25
UBC-208ENST00000540700 IL17CQ9P0M4 197 aa16.64■□□□□ 0.25
UBC-208ENST00000540700 CEP192Q8TEP8 1941 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 CCDC78A2IDD5 438 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 POM121BA6NF01 834 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 CCL22O00626 93 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 GAPDHSO14556 408 aaPredicted RBP16.63■□□□□ 0.25
UBC-208ENST00000540700 PRB1P04280 392 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 TNNT3P45378 269 aaPredicted RBP16.63■□□□□ 0.25
UBC-208ENST00000540700 MORF4L2Q15014 288 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 HOOK3Q86VS8 718 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 NUS1Q96E22 293 aa16.63■□□□□ 0.25
UBC-208ENST00000540700 LENG8Q96PV6 779 aaPredicted RBP16.63■□□□□ 0.25
UBC-208ENST00000540700 ZDHHC5Q9C0B5 715 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms