RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 MAML1Q92585 1016 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 SH3KBP1Q96B97 665 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 TSGA13Q96PP4 275 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 MAK16Q9BXY0 300 aaKnown RBP15.22■□□□□ 0.03
UBE3B-211ENST00000539843 SEMA6CQ9H3T2 930 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 PCDH9Q9HC56 1237 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 VPS18Q9P253 973 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 CHKBQ9Y259 395 aa15.22■□□□□ 0.03
UBE3B-211ENST00000539843 COL27A1Q8IZC6 1860 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-211ENST00000539843 C1orf232A0A0U1RR37 186 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 B8ZZF3 427 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 B4GAT1O43505 415 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 ITGB2P05107 769 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 PDHA1P08559 390 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 CD48P09326 243 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 POLD2P49005 469 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 STC1P52823 247 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 DSC2Q02487 901 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 TRIM14Q14142 442 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 CCDC13Q8IYE1 715 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 NAGSQ8N159 534 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 SCARF2Q96GP6 870 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-211ENST00000539843 CCDC74BQ96LY2 380 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 TAAR9Q96RI9 348 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 FUCA2Q9BTY2 467 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 RIOK2Q9BVS4 552 aaKnown RBP15.21■□□□□ 0.03
UBE3B-211ENST00000539843 ASPSCR1Q9BZE9 553 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 FAM117AQ9C073 453 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 RMI1Q9H9A7 625 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 ZNHIT2Q9UHR6 403 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 TMEM98Q9Y2Y6 226 aa15.21■□□□□ 0.03
UBE3B-211ENST00000539843 INPP4BO15327 924 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 EFSO43281 561 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 CBFA2T2O43439 604 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 IL4RP24394 825 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 CASP14P31944 242 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 PBX1P40424 430 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-211ENST00000539843 LIMK2P53671 638 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 RAB15P59190 212 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 PTSQ03393 145 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 C16orf72Q14CZ0 275 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 TGIF1Q15583 401 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 PYCR3Q53H96 274 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 CCDC70Q6NSX1 233 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 HDAC11Q96DB2 347 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 LYSMD1Q96S90 227 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 NUDT22Q9BRQ3 303 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 HERPUD2Q9BSE4 406 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 MLPHQ9BV36 600 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-211ENST00000539843 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-211ENST00000539843 FAM83DQ9H4H8 585 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 RAD18Q9NS91 495 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 FOXJ2Q9P0K8 574 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 IFNKQ9P0W0 207 aa15.2■□□□□ 0.02
UBE3B-211ENST00000539843 IGHV1OR21-1A0A087WYE8 117 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 IGHV5-10-1A0A0J9YXX1 117 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 LRRD1A4D1F6 860 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-211ENST00000539843 PPP1R12AO14974 1030 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-211ENST00000539843 AKR1B10O60218 316 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 GYPCP04921 128 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 HLA-DQB2P05538 268 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 ZFXP17010 805 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-211ENST00000539843 CD1CP29017 333 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 FASLGP48023 281 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 SLC18A3Q16572 532 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 TMEM71Q6P5X7 295 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 SLC9B2Q86UD5 537 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 ZFAND4Q86XD8 727 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 FAM129CQ86XR2 697 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 PHYKPLQ8IUZ5 450 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 IL22RA1Q8N6P7 574 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 RCBTB1Q8NDN9 531 aa15.19■□□□□ 0.02
UBE3B-211ENST00000539843 LOC400499M0QZD8 3231 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 OR5K4A6NMS3 321 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 C9orf172C9J069 976 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 SLC28A2O43868 658 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 MTA2O94776 668 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 CLDN7O95471 211 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 SOD1P00441 154 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 FUCA1P04066 466 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 ETV5P41161 510 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 CD86P42081 329 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 ARSEP51690 589 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 HHEXQ03014 270 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 SQSTM1Q13501 440 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 PDK1Q15118 436 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 ATP13A4Q4VNC1 1196 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 DCAF12Q5T6F0 453 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 CHST15Q7LFX5 561 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-211ENST00000539843 PATE1Q8WXA2 126 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 FAF2Q96CS3 445 aa15.18■□□□□ 0.02
UBE3B-211ENST00000539843 TEFMQ96QE5 360 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms