RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 DNAJC28Q9NX36 388 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MED1Q15648 1581 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CHD2O14647 1828 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 H0Y858 1186 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CILPO75339 1184 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PKMP14618 531 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TSPAN8P19075 237 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CPTPQ5TA50 214 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PLPP4Q5VZY2 271 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ARHGAP36Q6ZRI8 547 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 AARSD1Q9BTE6 412 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TOR4AQ9NXH8 423 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 RSL24D1Q9UHA3 163 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 DUOX1Q9NRD9 1551 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 CAMTA1Q9Y6Y1 1673 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 RCCD1A6NED2 376 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZBTB22O15209 634 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZBTB48P10074 688 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 PTX3P26022 381 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 L1CAMP32004 1257 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MARCKSL1P49006 195 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TAF10Q12962 218 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ZIK1Q3SY52 487 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 LIN54Q6MZP7 749 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 ARHGAP22Q7Z5H3 698 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 AP2M1Q96CW1 435 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 TDRD1Q9BXT4 1180 aaKnown RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 KCNN2Q9H2S1 579 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 EHD3Q9NZN3 535 aa6.47□□□□□ -1.37
LSAMP-207ENST00000539563 MAFBQ9Y5Q3 323 aaPredicted RBP6.47□□□□□ -1.37
LSAMP-207ENST00000539563 GLYATL1P3A0A0U1RQE8 302 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 H3BM21 787 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 DDX3YO15523 660 aaKnown RBP6.46□□□□□ -1.37
LSAMP-207ENST00000539563 CLDN9O95484 217 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 TCF4P15884 667 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 PTDSS1P48651 473 aaKnown RBP6.46□□□□□ -1.37
LSAMP-207ENST00000539563 PYDC2Q56P42 97 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 MFSD5Q6N075 450 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 TMC8Q8IU68 726 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 EXOC2Q96KP1 924 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 KCTD15Q96SI1 283 aaPredicted RBP6.46□□□□□ -1.37
LSAMP-207ENST00000539563 BCL2L14Q9BZR8 327 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 MAGEH1Q9H213 219 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 TLE6Q9H808 572 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 MBD2Q9UBB5 411 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 SH3GLB1Q9Y371 365 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 RAI2Q9Y5P3 530 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 UBE2QL1A1L167 161 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 NPEPPSL1A6NEC2 478 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 FAM86C2PA6NEL3 165 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 IPO13O94829 963 aaKnown RBP6.46□□□□□ -1.37
LSAMP-207ENST00000539563 UROSP10746 265 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 PRDX6P30041 224 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 OMPP47874 163 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 RALGDSQ12967 914 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 ZNF846Q147U1 533 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 PTPN20Q4JDL3 420 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 PJA1Q8NG27 643 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 RASSF5Q8WWW0 418 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 UPF1Q92900 1129 aaKnown RBP eCLIP6.46□□□□□ -1.37
LSAMP-207ENST00000539563 MECRQ9BV79 373 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 MIR1-1HGQ9H1L0 117 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 NUDT4Q9NZJ9 180 aa6.46□□□□□ -1.37
LSAMP-207ENST00000539563 CCDC162PA2VCL2 907 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MAGEB3O15480 346 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 KLHL18O94889 574 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CMPK1P30085 196 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CERCAMQ5T4B2 595 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 EEF1DP3Q658K8 133 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 RHBDF2Q6PJF5 856 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 FBXO22Q8NEZ5 403 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 JOSD2Q8TAC2 188 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 RBM4BQ9BQ04 359 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 RBM4Q9BWF3 364 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SLC25A51Q9H1U9 297 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 GULP1Q9UBP9 304 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 OGDHLQ9ULD0 1010 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 N6AMT1Q9Y5N5 214 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 NFAT5O94916 1531 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 UGT2B17O75795 530 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 GJB1P08034 283 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 NR2F6P10588 404 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CAPGP40121 348 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 POLR2JP52435 117 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SLC5A3P53794 718 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 POU5F1Q01860 360 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 FOLH1Q04609 750 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 DCTN2Q13561 401 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 SULT1C3Q6IMI6 304 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 KLHL24Q6TFL4 600 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 HIPK1Q86Z02 1210 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 C12orf50Q8NA57 414 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CPXM1Q96SM3 734 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 CDADC1Q9BWV3 514 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PCBD2Q9H0N5 130 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 POLR3HQ9Y535 204 aaPredicted RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 MATN3O15232 486 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 EDF1O60869 148 aaKnown RBP6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PRNPP04156 253 aa6.46□□□□□ -1.38
LSAMP-207ENST00000539563 PIRTP0C851 137 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms