RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 HDAC11Q96DB2 347 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 DTNBP1Q96EV8 351 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MASTLQ96GX5 879 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CEP295NLQ96MC4 621 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MAP7D2Q96T17 732 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MECRQ9BV79 373 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SPATA5L1Q9BVQ7 753 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 HERC2P3Q9BVR0 1158 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 CACNG6Q9BXT2 260 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 GCOM2Q9BZD3 368 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RWDD1Q9H446 243 aaPredicted RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 RIOX1Q9H6W3 641 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 IARS2Q9NSE4 1012 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ABT1Q9ULW3 272 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 MTMR6Q9Y217 621 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ATP11BQ9Y2G3 1177 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 NOSIPQ9Y314 301 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 FAM205AQ6ZU69 1335 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SALL3Q9BXA9 1300 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 IQGAP3Q86VI3 1631 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 SBNO1A3KN83 1393 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 ARHGEF10O15013 1369 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 LRPPRCP42704 1394 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 WDFY3Q8IZQ1 3526 aa3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 YTHDC2Q9H6S0 1430 aaKnown RBP3.87□□□□□ -1.79
AC055720.1-201ENST00000539552 GVINP1Q7Z2Y8 2422 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MYO9AB2RTY4 2548 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 HTR3EA5X5Y0 456 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 OOEPA6NGQ2 149 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 KRTAP29-1A8MX34 341 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PRR5-ARHGAP8B1AHC4 643 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 H0YIV9 168 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 POLRMTO00411 1230 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RASGRF2O14827 1237 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TO15178 435 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ADAMDEC1O15204 470 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PJA2O43164 708 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PAPSS1O43252 624 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 DAB1O75553 588 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MTRF1O75570 445 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 AGFG2O95081 481 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 KNG1P01042 644 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 URODP06132 367 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 UROSP10746 265 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MC5RP33032 325 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CPOXP36551 454 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MDH1P40925 334 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 GCLCP48506 637 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RAB28P51157 221 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CCR3P51677 355 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PMS2P54278 862 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RRADP55042 308 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ADARP55265 1226 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 GABPB1Q06547 395 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF844Q08AG5 666 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 NIPAL4Q0D2K0 466 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CCDC15Q0P6D6 951 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TOP3AQ13472 1001 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 GPM6BQ13491 265 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CBFBQ13951 182 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 GAMTQ14353 236 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 DPCR1Q3MIW9 517 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 FUT11Q495W5 492 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 LRRC24Q50LG9 513 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 KCNT1Q5JUK3 1230 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MFSD14BQ5SR56 506 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RIPPLY2Q5TAB7 128 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MFSD7Q6UXD7 560 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PPP1R21Q6ZMI0 780 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 SMIM5Q71RC9 77 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MED25Q71SY5 747 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNF627Q7L945 461 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RRM2BQ7LG56 351 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TAF8Q7Z7C8 310 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TC2NQ8N9U0 490 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CAMKVQ8NCB2 501 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 MIEF2Q96C03 454 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 SPACA9Q96E40 222 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 SGF29Q96ES7 293 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 RPL10LQ96L21 214 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 WDFY2Q96P53 400 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ERP44Q9BS26 406 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 KIFC3Q9BVG8 833 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 NUP85Q9BW27 656 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TTYH3Q9C0H2 523 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 STMN4Q9H169 189 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 GSTO2Q9H4Y5 243 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 POLR1BQ9H9Y6 1135 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 PRMT8Q9NR22 394 aaPredicted RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 SLC2A4RGQ9NR83 387 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 SOHLH2Q9NX45 425 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 DNMT3BQ9UBC3 853 aaKnown RBP3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 FBXL17Q9UF56 701 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 FBXO40Q9UH90 709 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ZNHIT2Q9UHR6 403 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 CD207Q9UJ71 328 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 TLK1Q9UKI8 766 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 USP22Q9UPT9 525 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 ZBTB1Q9Y2K1 713 aa3.86□□□□□ -1.79
AC055720.1-201ENST00000539552 NR2E1Q9Y466 385 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms