RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 VPS41P49754 854 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 PPARDQ03181 441 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 SEMA5AQ13591 1074 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 PPM1JQ5JR12 505 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 DOK6Q6PKX4 331 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 ADAMTSL4Q6UY14 1074 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 GSTA5Q7RTV2 222 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 NLRP8Q86W28 1048 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 LMX1AQ8TE12 382 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 COX14Q96I36 57 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 LRRC40Q9H9A6 602 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 PAK5Q9P286 719 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 KLQ9UEF7 1012 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 APOBEC3BQ9UH17 382 aaKnown RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 NEU2Q9Y3R4 380 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 ST14Q9Y5Y6 855 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 ARID1BQ8NFD5 2236 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 TCRBV7S3A2A0A539 114 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 TNNT3P45378 269 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HK3P52790 923 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SUZ12Q15022 739 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PRRT3Q5FWE3 981 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CCDC137Q6PK04 289 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SYT10Q6XYQ8 523 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 DGLUCYQ7Z3D6 616 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 OR13C4Q8NGS5 318 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CCL4L1Q8NHW4 92 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SPATA16Q9BXB7 569 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 DDX47Q9H0S4 455 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 TRABDQ9H4I3 376 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CYP4F12Q9HCS2 524 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 IL26Q9NPH9 171 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PHPT1Q9NRX4 125 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 KCTD5Q9NXV2 234 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PLEKHM1Q9Y4G2 1056 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SAR1BQ9Y6B6 198 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PCNX2A6NKB5 2137 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PRSS38A1L453 326 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CCDC78A2IDD5 438 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CTAGE9A4FU28 777 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 RGSL1A5PLK6 1076 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 YKT6O15498 198 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 AQP9O43315 295 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 LDB2O43679 373 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 PHF2O75151 1096 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SUN1O94901 812 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HTR1BP28222 390 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 FDFT1P37268 417 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 GRK6P43250 576 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 DCDC1P59894 354 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HNRNPKP61978 463 aaKnown RBP eCLIP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 TMPRSS15P98073 1019 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 POU6F1Q14863 301 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 DEFB133Q30KQ1 61 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 KHDC1Q4VXA5 237 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CERCAMQ5T4B2 595 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 FAM151BQ6UXP7 276 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 MARK2Q7KZI7 788 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SFTPA2Q8IWL1 248 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 RAVER1Q8IY67 606 aaKnown RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 OR4K2Q8NGD2 314 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 ATL2Q8NHH9 583 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HIC2Q96JB3 615 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 TMEM168Q9H0V1 697 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HOMER3Q9NSC5 361 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 TOR4AQ9NXH8 423 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 HACD3Q9P035 362 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 NFKBIL1Q9UBC1 381 aaPredicted RBP15.65■□□□□ 0.1
RPAIN-206ENST00000539417 MOSPD1Q9UJG1 213 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 SUFUQ9UMX1 484 aa15.65■□□□□ 0.1
RPAIN-206ENST00000539417 CNOT1A5YKK6 2376 aaKnown RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A9O60656 530 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 MTX2O75431 263 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 RASGRP1O95267 797 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 KRT14P02533 472 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 APRTP07741 180 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 CEACAM1P13688 526 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A6P19224 532 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A1P22309 533 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A4P22310 534 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A3P35503 534 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A5P35504 534 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 ZNF140P52738 457 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 ETF1P62495 437 aaKnown RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 DNAJC3Q13217 504 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 TAF1AQ15573 450 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 TRIP6Q15654 476 aaKnown RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 CHRNA6Q15825 494 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 ATP13A5Q4VNC0 1218 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 CCDC38Q502W7 563 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 N4BP2L1Q5TBK1 243 aaPredicted RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 SLCO6A1Q86UG4 719 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 TRAM1L1Q8N609 369 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 BRSK1Q8TDC3 778 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 PPP1R2P1Q96PQ5 205 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 SRPK1Q96SB4 655 aaKnown RBP15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A7Q9HAW7 530 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A10Q9HAW8 530 aa15.64■□□□□ 0.09
RPAIN-206ENST00000539417 UGT1A8Q9HAW9 530 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms