RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MICAL3Q7RTP6 2002 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 TOP1MTQ969P6 601 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 ZFRQ96KR1 1074 aaKnown RBP17.84■□□□□ 0.45
GNE-204ENST00000539208 C3orf30Q96M34 536 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 MID1IP1Q9NPA3 183 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 CCDC167Q9P0B6 97 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 LHX3Q9UBR4 397 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 RNF112Q9ULX5 631 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 FAM50BQ9Y247 325 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 COMMD10Q9Y6G5 202 aa17.84■□□□□ 0.45
GNE-204ENST00000539208 KLK8O60259 260 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 CLASP2O75122 1294 aaKnown RBP17.83■□□□□ 0.45
GNE-204ENST00000539208 VPS26AO75436 327 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 PKMP14618 531 aaKnown RBP17.83■□□□□ 0.45
GNE-204ENST00000539208 MC4RP32245 332 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 LCP2Q13094 533 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 RAB33AQ14088 237 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 MMEL1Q495T6 779 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 FBXO39Q8N4B4 442 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 ASB9Q96DX5 294 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 GPR21Q99679 349 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 AKTIPQ9H8T0 292 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 DLGAP2Q9P1A6 1054 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 SUCOQ9UBS9 1254 aaKnown RBP17.83■□□□□ 0.45
GNE-204ENST00000539208 TMCO1Q9UM00 188 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 OR51B4Q9Y5P0 310 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 BRCA2P51587 3418 aa17.83■□□□□ 0.45
GNE-204ENST00000539208 GFRA2O00451 464 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 STX16O14662 325 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 STX7O15400 261 aaKnown RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 LINGO3P0C6S8 592 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 ARSAP15289 507 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 IKBKEQ14164 716 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 AARS2Q5JTZ9 985 aaKnown RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 C8orf82Q6P1X6 216 aaPredicted RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 DEFB128Q7Z7B8 93 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 PIANPQ8IYJ0 282 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 BHLHE22Q8NFJ8 381 aaPredicted RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 ZNF296Q8WUU4 475 aaPredicted RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 SPDL1Q96EA4 605 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 BTBD9Q96Q07 612 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 FEM1AQ9BSK4 669 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 HERC2P3Q9BVR0 1158 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 EBF3Q9H4W6 596 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 PAK6Q9NQU5 681 aaPredicted RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 SPATS2LQ9NUQ6 558 aaKnown RBP17.83■□□□□ 0.44
GNE-204ENST00000539208 FKBPLQ9UIM3 349 aa17.83■□□□□ 0.44
GNE-204ENST00000539208 COL4A6Q14031 1691 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 ANAPC1Q9H1A4 1944 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 SUPT3HB4E1H0 165 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 H0Y626 953 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 FZD6O60353 706 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 NRP2O60462 931 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 SNAP91O60641 907 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 SUPT3HO75486 399 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 ECI2O75521 394 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 RPS17P08708 135 aaKnown RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 UQCRBP14927 111 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 GPX3P22352 226 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 CDKN1CP49918 316 aaPredicted RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 STX1BP61266 288 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 SMAD3P84022 425 aaKnown RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 CLCQ05315 142 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 ANKS6Q68DC2 871 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 OR52E8Q6IFG1 317 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 PSAPL1Q6NUJ1 521 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 TXNDC11Q6PKC3 985 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 DNAJB7Q7Z6W7 309 aaPredicted RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 TMEM150AQ86TG1 271 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 HJURPQ8NCD3 748 aaPredicted RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 TWIST2Q8WVJ9 160 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 FUBP1Q96AE4 644 aaKnown RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 SMIM14Q96QK8 99 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 CYP2S1Q96SQ9 504 aa17.82■□□□□ 0.44
GNE-204ENST00000539208 DNMT3BQ9UBC3 853 aaKnown RBP17.82■□□□□ 0.44
GNE-204ENST00000539208 ATP6AP2A0A1C7CYW4 349 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 LRRC14BA6NHZ5 514 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 BBIP1A8MTZ0 92 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 PPP6CO00743 305 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 TRIM24O15164 1050 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 TBL1XO60907 577 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 VPS4BO75351 444 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 ATP6AP2O75787 350 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 LYNP07948 512 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 ALDOCP09972 364 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 MBL2P11226 248 aaPredicted RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 EEF1DP29692 281 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 PTGER3P43115 390 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 MRPS22P82650 360 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 TRAP1Q12931 704 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 TRIM25Q14258 630 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 TSNQ15631 228 aaKnown RBP17.81■□□□□ 0.44
GNE-204ENST00000539208 LRRC36Q1X8D7 754 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 LINGO4Q6UY18 593 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 PHYKPLQ8IUZ5 450 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 TCEAL8Q8IYN2 117 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 SLC39A11Q8N1S5 342 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 TRPC4APQ8TEL6 797 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 KCNJ9Q92806 393 aa17.81■□□□□ 0.44
GNE-204ENST00000539208 ROPN1LQ96C74 230 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms