RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 SCAMP4Q969E2 229 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 AP2M1Q96CW1 435 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 NUDCD1Q96RS6 583 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 AGPAT1Q99943 283 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 PHTF1Q9UMS5 762 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 PRKAB1Q9Y478 270 aa13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 ZNF106Q9H2Y7 1883 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-206ENST00000538456 A0A1W2PQ67 120 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 EIF3CLB5ME19 914 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 K7EM74 188 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 INPP4BO15327 924 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ASMTLO95671 621 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 TPM2P07951 284 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 KRT7P08729 469 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 STAT5AP42229 794 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 NOP2P46087 812 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 MC1RQ01726 317 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 DPTQ07507 201 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ADAMTSL4Q6UY14 1074 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ARFGAP1Q8N6T3 406 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 SCRN2Q96FV2 425 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 SCARF2Q96GP6 870 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 SMIM14Q96QK8 99 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 MCCC1Q96RQ3 725 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 EIF3CQ99613 913 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ZPBPQ9BS86 351 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 ABCG8Q9H221 673 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 FBXO8Q9NRD0 319 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 TAS2R14Q9NYV8 317 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 TMEM184BQ9Y519 407 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 PCYT1BQ9Y5K3 369 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 RPS6KL1Q9Y6S9 549 aa13.91□□□□□ -0.18
SMARCA4-206ENST00000538456 TMCO5BA8MYB1 307 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 POLR1CO15160 346 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 PRPSAP2O60256 369 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 PGLSO95336 258 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 DLGAP3O95886 979 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 F8A1P23610 371 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 HSPA9P38646 679 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 COPB1P53618 953 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 MAMLD1Q13495 774 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 LRP8Q14114 963 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 DPYSQ14117 519 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 ARMC12Q5T9G4 340 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 LRRC66Q68CR7 880 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 ACAD10Q6JQN1 1059 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 CHST15Q7LFX5 561 aaPredicted RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 TECPR1Q7Z6L1 1165 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 ESX1Q8N693 406 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 TEX19Q8NA77 164 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 NEK11Q8NG66 645 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 AGAP2Q99490 1192 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 MGME1Q9BQP7 344 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 ULBP3Q9BZM4 244 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 TRIT1Q9H3H1 467 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 STN1Q9H668 368 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 CWC15Q9P013 229 aaKnown RBP13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 TBC1D29Q9UFV1 150 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 ZNHIT2Q9UHR6 403 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 KCNK6Q9Y257 313 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 KCTD3Q9Y597 815 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 KCNMB2Q9Y691 235 aa13.9□□□□□ -0.18
SMARCA4-206ENST00000538456 TNRC6AQ8NDV7 1962 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 MKRN2OSH3BPM6 223 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 SNX2O60749 519 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 PEX11BO96011 259 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 ATP1A1P05023 1023 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 MIPP30301 263 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 DLSTP36957 453 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 UQCRFS1P47985 274 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 FOXM1Q08050 763 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 ERV3-1Q14264 604 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 CDKAL1Q5VV42 579 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 BBS5Q8N3I7 341 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 LZTR1Q8N653 840 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 RIOK2Q9BVS4 552 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 TRIM7Q9C029 511 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 SARS2Q9NP81 518 aaKnown RBP13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 PARVAQ9NVD7 372 aa13.89□□□□□ -0.19
SMARCA4-206ENST00000538456 MAFKO60675 156 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 RNF8O76064 485 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 PDHA1P08559 390 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 FURINP09958 794 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ACP5P13686 325 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ZNF28P17035 718 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 MMP13P45452 471 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 CD97P48960 835 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 TMCO3Q6UWJ1 677 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ASB18Q6ZVZ8 466 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 TMEM135Q86UB9 458 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 SLC9B2Q86UD5 537 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ATPAF2Q8N5M1 289 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 EXD1Q8NHP7 514 aa13.88□□□□□ -0.19
SMARCA4-206ENST00000538456 PIH1D2Q8WWB5 315 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms