RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 CD101Q93033 1021 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 AJUBAQ96IF1 538 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 RBM41Q96IZ5 413 aaKnown RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 PRICKLE1Q96MT3 831 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 PEBP4Q96S96 227 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 PNKPQ96T60 521 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 PRMT1Q99873 361 aaKnown RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 MAK16Q9BXY0 300 aaKnown RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 FAM126AQ9BYI3 521 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ZDHHC5Q9C0B5 715 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 RAB6CQ9H0N0 254 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 GOLPH3Q9H4A6 298 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 RETREG1Q9H6L5 497 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ANKZF1Q9H8Y5 726 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 TBC1D17Q9HA65 648 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ANLNQ9NQW6 1124 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ABCB8Q9NUT2 735 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 KLHL11Q9NVR0 708 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 GPATCH2LQ9NWQ4 482 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 MPP6Q9NZW5 540 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 RCOR3Q9P2K3 495 aaPredicted RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 DEC1Q9P2X7 70 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 MAGEL2Q9UJ55 1249 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 GGA2Q9UJY4 613 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 FBXO10Q9UK96 956 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 AMFRQ9UKV5 643 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 HPCAL4Q9UM19 191 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 NDRG2Q9UN36 371 aaKnown RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 RRP15Q9Y3B9 282 aaKnown RBP4.39□□□□□ -1.71
SNHG1-208ENST00000538266 HYOU1Q9Y4L1 999 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ALG6Q9Y672 507 aa4.39□□□□□ -1.71
SNHG1-208ENST00000538266 ADAMTS20P59510 1910 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 MYO10Q9HD67 2058 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 KIAA1549LQ6ZVL6 1849 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 A0A0G2JNJ9 132 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 A0A0U1RQJ8 604 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 KANSL1LA0AUZ9 987 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 PI4K2BG5E9Z4 385 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FAM72CH0Y354 149 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 I6L893 689 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 MYO1CO00159 1063 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TIMM44O43615 452 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RAMP2O60895 175 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ULK1O75385 1050 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ATP5BP06576 529 aaKnown RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RHOCP08134 193 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TCF4P15884 667 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 GOT1P17174 413 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 DRD1P21728 446 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CTNNA2P26232 953 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 HLA-FP30511 346 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CTNNA1P35221 906 aaKnown RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 NNMTP40261 264 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 OPRD1P41143 372 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TNNT3P45378 269 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 HCAR3P49019 387 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 DNA2P51530 1060 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SGSHP51688 502 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RWDD2BP57060 319 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 GEMIN4P57678 1058 aaKnown RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TAS2R40P59535 323 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 PHC1P78364 1004 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SULT2A1Q06520 285 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ADCY2Q08462 1091 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SEMA3BQ13214 749 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 SLC12A1Q13621 1099 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 DPYSL3Q14195 570 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 DMC1Q14565 340 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 EIF4HQ15056 248 aaKnown RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 PON2Q15165 354 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RPS6KA1Q15418 735 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CA9Q16790 459 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 PARP15Q460N3 678 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FBXO43Q4G163 708 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ALFQ53S48 1182 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TFDP3Q5H9I0 405 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TMEM196Q5HYL7 178 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF569Q5MCW4 686 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CCDC181Q5TID7 509 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FAM72AQ5TYM5 149 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 MANEALQ5VSG8 457 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 IL31Q6EBC2 164 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 TXNRD3NBQ6F5E7 133 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FAM72DQ6L9T8 149 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 WDR93Q6P2C0 686 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 BORAQ6PGQ7 559 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 UNQ6494/PRO21346Q6UXR6 183 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ZNF783Q6ZMS7 281 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FRMD7Q6ZUT3 714 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 ESPNLQ6ZVH7 1005 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 CYP4V2Q6ZWL3 525 aaPredicted RBP4.38□□□□□ -1.71
SNHG1-208ENST00000538266 C14orf80Q86SX3 495 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 NT5DC3Q86UY8 548 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RASSF3Q86WH2 238 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 FAM72BQ86X60 149 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 VSIG1Q86XK7 387 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 KBTBD2Q8IY47 623 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 KATNAL2Q8IYT4 538 aa4.38□□□□□ -1.71
SNHG1-208ENST00000538266 RCOR2Q8IZ40 523 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms