RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 FEM1AQ9BSK4 669 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CCDC32Q9BV29 185 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ABCB9Q9NP78 766 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RASSF1Q9NS23 344 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NKRFO15226 690 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NTSR2O95665 410 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CSTF2P33240 577 aaKnown RBP eCLIP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 HOXD13P35453 343 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GTF2BQ00403 316 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CDH17Q12864 832 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GRIK2Q13002 908 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SLC36A3Q495N2 470 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 LIPMQ5VYY2 423 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 IGFN1Q86VF2 1251 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SLC15A4Q8N697 577 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RNFT2Q96EX2 444 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 CERS2Q96G23 380 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FBXL20Q96IG2 436 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 TOR4AQ9NXH8 423 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PRKAG2Q9UGJ0 569 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 GLS2Q9UI32 602 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 IKZF3Q9UKT9 509 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 G3V2T6 193 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 KCNK1O00180 336 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RFPL1O75677 317 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 IL6P05231 212 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 THRBP10828 461 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 FUT4P22083 530 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PRKACBP22694 351 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 RXRGP48443 463 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SLC16A1P53985 500 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 NOMO3P69849 1222 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 PKN3Q6P5Z2 889 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 ESX1Q8N693 406 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 SMG8Q8ND04 991 aaKnown RBP5.39□□□□□ -1.55
PTPRD-213ENST00000537002 HPDLQ96IR7 371 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 POLG2Q9UHN1 485 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 U3KQV3 271 aa5.39□□□□□ -1.55
PTPRD-213ENST00000537002 KCPQ6ZWJ8 1503 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ADAMTS3O15072 1205 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 LINC00032P0C843 101 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MMP8P22894 467 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BCAT1P54687 386 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 GAD2Q05329 585 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 VPS26BQ4G0F5 336 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CDC42EP5Q6NZY7 148 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 LGI2Q8N0V4 545 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PTGR2Q8N8N7 351 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 REXO5Q96IC2 774 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SIAEQ9HAT2 523 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ADARB2Q9NS39 739 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 IFT80Q9P2H3 777 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TRMT6Q9UJA5 497 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SARDHQ9UL12 918 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SLC9A8Q9Y2E8 581 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 A0A087X1B8 175 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZSCAN5BA6NJL1 495 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PRKD3O94806 890 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 EPN2O95208 641 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HIST1H2AGP0C0S8 130 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF182P17025 639 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HIST1H2ADP20671 130 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NDST1P52848 882 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 S100A12P80511 92 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PTPN11Q06124 597 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TUBB3Q13509 450 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 DDX39BQ13838 428 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TAZQ16635 292 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZNF484Q5JVG2 852 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM236Q5W0B7 351 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SCIMPQ6UWF3 145 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 REM2Q8IYK8 340 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HIST1H2AHQ96KK5 128 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TEKT5Q96M29 485 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 HIST1H2AJQ99878 128 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 H2AFJQ9BTM1 129 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 FTHL17Q9BXU8 183 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ATXN3LQ9H3M9 355 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ZBTB26Q9HCK0 441 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 XPNPEP1Q9NQW7 623 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 ANKEF1Q9NU02 776 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 MTRRQ9UBK8 725 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PCDHGA10Q9Y5H3 936 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BCLAF3A2AJT9 711 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 EI24O14681 340 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TRUB2O95900 331 aaKnown RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 IFNA16P05015 189 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CYP2C8P10632 490 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 STAT5BP51692 787 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 AP2S1P53680 142 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 NIPAL4Q0D2K0 466 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 KCNJ11Q14654 390 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 PLEKHG6Q3KR16 790 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 INO80DQ53TQ3 878 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-213ENST00000537002 CUZD1Q86UP6 607 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 SVOPLQ8N434 492 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 FBXO39Q8N4B4 442 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 TMEM176AQ96HP8 235 aa5.38□□□□□ -1.55
PTPRD-213ENST00000537002 BTN2A3PQ96KV6 586 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms