RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 EIF3IQ13347 325 aaKnown RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 TEX44Q53QW1 395 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 NRSN1Q8IZ57 195 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 Q8N9G6 341 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 LRRC57Q8N9N7 239 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 UBE2Q2Q8WVN8 375 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PDXPQ96GD0 296 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 SCARF2Q96GP6 870 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 RBM41Q96IZ5 413 aaKnown RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 TRIB3Q96RU7 358 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 RBM15Q96T37 977 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 STRADBQ9C0K7 418 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 LACRTQ9GZZ8 138 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 SLC25A51Q9H1U9 297 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 LRRN3Q9H3W5 708 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PCDH9Q9HC56 1237 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 ATXN7L1Q9ULK2 861 aaPredicted RBP12.41□□□□□ -0.42
PRKDC-207ENST00000536483 HYOU1Q9Y4L1 999 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PCDHGA7Q9Y5G6 932 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 HEY1Q9Y5J3 304 aa12.41□□□□□ -0.42
PRKDC-207ENST00000536483 MYO18BQ8IUG5 2567 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 RGSL1A5PLK6 1076 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 ANKRD66B4E2M5 251 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 TMX2-CTNND1H3BSU7 103 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 CACNB4O00305 520 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-207ENST00000536483 MTSS1O43312 755 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 SLC28A2O43868 658 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 NOBOXO60393 691 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 CST8O60676 142 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 IPO7O95373 1038 aaKnown RBP12.4□□□□□ -0.42
PRKDC-207ENST00000536483 PYGLP06737 847 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 CTNNA2P26232 953 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 CCKBRP32239 447 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 STC1P52823 247 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 ADCY2Q08462 1091 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 ITKQ08881 620 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 XRCC4Q13426 336 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 ACOX1Q15067 660 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 OGFOD3Q6PK18 319 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 NPNTQ6UXI9 565 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 Q6ZVL8 140 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 BBS12Q6ZW61 710 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 HSD11B1LQ7Z5J1 315 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 RFX6Q8HWS3 928 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 SFTPA2Q8IWL1 248 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 PELI3Q8N2H9 469 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 EXD3Q8N9H8 876 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 GPR156Q8NFN8 814 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 OR56A4Q8NGH8 313 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 PDCD6IPQ8WUM4 868 aaKnown RBP12.4□□□□□ -0.42
PRKDC-207ENST00000536483 NUS1Q96E22 293 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 TEKT5Q96M29 485 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 TMEM74Q96NL1 305 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 VAT1Q99536 393 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 BAG1Q99933 345 aaPredicted RBP12.4□□□□□ -0.42
PRKDC-207ENST00000536483 PISDQ9UG56 409 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 TFR2Q9UP52 801 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 DUSP10Q9Y6W6 482 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 BSNQ9UPA5 3926 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 BOD1L1Q8NFC6 3051 aa12.4□□□□□ -0.42
PRKDC-207ENST00000536483 UNC13CQ8NB66 2214 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 LRRK1Q38SD2 2015 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 CCDC66A2RUB6 948 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 TMEM202A6NGA9 273 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 HACD1B0YJ81 288 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 SOD1P00441 154 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 JMJD7P0C870 316 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 MYCLP1P12525 358 aaPredicted RBP12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ITIH1P19827 911 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ETV3P41162 512 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 KCNC4Q03721 635 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 WASHC5Q12768 1159 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 NFATC3Q12968 1075 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 QPCTQ16769 361 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 LINC00303Q3SY05 128 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ODF2Q5BJF6 829 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 LRRC66Q68CR7 880 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ADAMTSL4Q6UY14 1074 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 TAF8Q7Z7C8 310 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 DAAM2Q86T65 1068 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 TSPAN33Q86UF1 283 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 NT5DC3Q86UY8 548 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 CCNJLQ8IV13 435 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 OR1E3Q8WZA6 343 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 KRT35Q92764 455 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 LGR4Q9BXB1 951 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
PRKDC-207ENST00000536483 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 CLMPQ9H6B4 373 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 FGF22Q9HCT0 170 aa12.39□□□□□ -0.43
PRKDC-207ENST00000536483 MRPL40Q9NQ50 206 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms