RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 MAMSTRQ6ZN01 415 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 SLC26A9Q7LBE3 791 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 MAVSQ7Z434 540 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 SATL1Q86VE3 508 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 UNC93AQ86WB7 457 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 CMTM8Q8IZV2 173 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 TMEM86AQ8N2M4 240 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 CELF5Q8N6W0 485 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 CNTD1Q8N815 330 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 CSPG4P5Q96PW8 444 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 TRIM56Q9BRZ2 755 aaKnown RBP11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 TPK1Q9H3S4 243 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 RETREG1Q9H6L5 497 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 EFCAB1Q9HAE3 211 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 SNX15Q9NRS6 342 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 GPATCH2LQ9NWQ4 482 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 BFARQ9NZS9 450 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 TMEM216Q9P0N5 145 aa11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 KIF26AQ9ULI4 1882 aaPredicted RBP11.62□□□□□ -0.55
CHRNB1-202ENST00000536404 DENND4CQ5VZ89 1909 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 LOC100653049A0A140TA62 436 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 GABRDO14764 452 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 MTSS1O43312 755 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 CNOT3O75175 753 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 KRT34O76011 436 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 CAPNS1P04632 268 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 SMIM18P0DKX4 95 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 COL6A2P12110 1019 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 LMO2P25791 158 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 MGAT1P26572 445 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 PIK3R1P27986 724 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 CTHP32929 405 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 CXCL12P48061 93 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 NUDT2P50583 147 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 GBE1Q04446 702 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 DMWDQ09019 674 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 PDAP1Q13442 181 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 ART3Q13508 389 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 MAPRE2Q15555 327 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 SMUG1Q53HV7 270 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 TCHHL1Q5QJ38 904 aaPredicted RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 ARHGAP17Q68EM7 881 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 NIPAL1Q6NVV3 410 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 RNF111Q6ZNA4 994 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 Q6ZS52 159 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 DPH6Q7L8W6 267 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 LIMS2Q7Z4I7 341 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 RALGPS2Q86X27 583 aaPredicted RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 SCN4BQ8IWT1 228 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 AFAP1L2Q8N4X5 818 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 MSANTD3Q96H12 275 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 IL22Q9GZX6 179 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 C2orf42Q9NWW7 574 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 THG1LQ9NWX6 298 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 NCDNQ9UBB6 729 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 RABL2BQ9UNT1 228 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 PRELID1Q9Y255 219 aa11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 ZNF638Q14966 1978 aaKnown RBP11.61□□□□□ -0.55
CHRNB1-202ENST00000536404 CCDC160A6NGH7 325 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CAPN8A6NHC0 703 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CACNA1AO00555 2505 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 PSMD3O43242 534 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 DNAJA2O60884 412 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 FBXO21O94952 628 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CRTAMO95727 393 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 MSL3P1P0C860 447 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 SERPINB5P36952 375 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 LHX1P48742 406 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 RPL14P50914 215 aaKnown RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CCR3P51677 355 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 KPNA2P52292 529 aaKnown RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 SESN2P58004 480 aaPredicted RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 LRRC32Q14392 662 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CA9Q16790 459 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 ITPRIPL2Q3MIP1 535 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 PKDCCQ504Y2 493 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 NCBP2-AS2Q69YL0 99 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 FAM171BQ6P995 826 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 MON1AQ86VX9 555 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 SPATA2LQ8IUW3 424 aaPredicted RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 SPEM1Q8N4L4 309 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 PDCD6IPQ8WUM4 868 aaKnown RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 MRPS31Q92665 395 aaKnown RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 FAM83CQ9BQN1 747 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 IER2Q9BTL4 223 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 EFHD1Q9BUP0 239 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 FAM126AQ9BYI3 521 aaPredicted RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 RBM38Q9H0Z9 239 aaKnown RBP11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 GBA3Q9H227 469 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 NMRAL1Q9HBL8 299 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 HPS4Q9NQG7 708 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 GID8Q9NWU2 228 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 GIN1Q9NXP7 522 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 DTLQ9NZJ0 730 aa11.6□□□□□ -0.55
CHRNB1-202ENST00000536404 CDYLQ9Y232 598 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms