RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 RPS27LQ71UM5 84 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 TLK2Q86UE8 772 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 IFNEQ86WN2 208 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 LURAP1LQ8IV03 231 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ABI1Q8IZP0 508 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MPP5Q8N3R9 675 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR6Q1Q8NGQ2 317 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 C1orf216Q8TAB5 229 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DEDD2Q8WXF8 326 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CLEC4DQ8WXI8 215 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLCO2A1Q92959 643 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 LPPQ93052 612 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CNDP1Q96KN2 507 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SPACA7Q96KW9 195 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MAGEB10Q96LZ2 347 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 YME1L1Q96TA2 773 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 C12orf57Q99622 126 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZNF577Q9BSK1 485 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PI4K2AQ9BTU6 479 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 DHRS4Q9BTZ2 278 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SMOC2Q9H3U7 446 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLC38A10Q9HBR0 1119 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ACOXLQ9NUZ1 547 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MAP3K20Q9NYL2 800 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 APEX2Q9UBZ4 518 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TRMT112Q9UI30 125 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 USP22Q9UPT9 525 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 KCNH4Q9UQ05 1017 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PLXNB2O15031 1838 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NID2Q14112 1375 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ATRNL1Q5VV63 1379 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR5K3A6NET4 321 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TRIM64A6NGJ6 449 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZNF701M0R085 212 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 NFIBO00712 420 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SCAMP3O14828 347 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 PLD2O14939 933 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 UPK1BO75841 260 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 BEST1O76090 585 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 VNN1O95497 513 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HLA-DRAP01903 254 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MBL2P11226 248 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 CSKP41240 450 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SCNN1GP51170 649 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ARHGDIBP52566 201 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CTSWP56202 376 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PSMC5P62195 406 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GSTO1P78417 241 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 MYL7Q01449 175 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ENPEPQ07075 957 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TP53BP2Q13625 1128 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 GRB7Q14451 532 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 HIST2H2ACQ16777 129 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 PTPRNQ16849 979 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLC36A3Q495N2 470 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 FLYWCH1Q4VC44 716 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PYCR3Q53H96 274 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ESCO2Q56NI9 601 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TMEM81Q6P7N7 255 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CORO6Q6QEF8 472 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 NPNTQ6UXI9 565 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 STXBP4Q6ZWJ1 553 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 STRADAQ7RTN6 431 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 EFL1Q7Z2Z2 1120 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 FRMD5Q7Z6J6 570 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 CMTR2Q8IYT2 770 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 HS3ST5Q8IZT8 346 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR8H3Q8N146 312 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TERB1Q8NA31 727 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR7D4Q8NG98 312 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR7A2PQ8NGA2 310 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 OR6P1Q8NGX9 317 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 LHFPL5Q8TAF8 219 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLC7A14Q8TBB6 771 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 FANK1Q8TC84 345 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SLC22A17Q8WUG5 538 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 TMEM80Q96HE8 168 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 PIGSQ96S52 555 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 SERPINI1Q99574 410 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 BCL7BQ9BQE9 202 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 RTKNQ9BST9 563 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 WDR12Q9GZL7 423 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 DSN1Q9H410 356 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZBTB20Q9HC78 741 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 POLR3BQ9NW08 1133 aaPredicted RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 ASNSD1Q9NWL6 643 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 ZC3H7BQ9UGR2 993 aaKnown RBP3.72□□□□□ -1.81
MCF2-210ENST00000536274 BAG5Q9UL15 447 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 RAD54BQ9Y620 910 aa3.72□□□□□ -1.81
MCF2-210ENST00000536274 UGT2B11O75310 529 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 TNFRSF21O75509 655 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 CSDE1O75534 798 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 DKK1O94907 266 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 P4HBP07237 508 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 CALML3P27482 149 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 AXLP30530 894 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 LRPAP1P30533 357 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 GPC1P35052 558 aa3.71□□□□□ -1.82
MCF2-210ENST00000536274 RPL22P35268 128 aaKnown RBP3.71□□□□□ -1.82
MCF2-210ENST00000536274 ZNF76P36508 570 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms