RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 DOK6Q6PKX4 331 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 RD3Q7Z3Z2 195 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 RAVER1Q8IY67 606 aaKnown RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 ZNF548Q8NEK5 533 aaPredicted RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 OR56A4Q8NGH8 313 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 RHBDD1Q8TEB9 315 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 PPP1R2P1Q96PQ5 205 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 LRRC61Q9BV99 259 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 SPATA16Q9BXB7 569 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 TRABDQ9H4I3 376 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 IL26Q9NPH9 171 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 PHPT1Q9NRX4 125 aaPredicted RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 KCTD5Q9NXV2 234 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 KLQ9UEF7 1012 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 BPTFQ12830 3046 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 CCL22O00626 93 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 YKT6O15498 198 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 FFAR2O15552 330 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 FLRT2O43155 660 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 SUN1O94901 812 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 KRT14P02533 472 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 MYF5P13349 255 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 KCNA4P22459 653 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 HK3P52790 923 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 DCDC1P59894 354 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 ETF1P62495 437 aaKnown RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 TAF1AQ15573 450 aaPredicted RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 CCDC137Q6PK04 289 aaKnown RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 OR13C4Q8NGS5 318 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 CCL4L1Q8NHW4 92 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 BRSK1Q8TDC3 778 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 LMX1AQ8TE12 382 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 SRPK1Q96SB4 655 aaKnown RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 NAP1L3Q99457 506 aaPredicted RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 DDX47Q9H0S4 455 aaKnown RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 SUDS3Q9H7L9 328 aaPredicted RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 HACD3Q9P035 362 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 NFKBIL1Q9UBC1 381 aaPredicted RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 APOBEC3BQ9UH17 382 aaKnown RBP17.77■□□□□ 0.44
DDX55-204ENST00000536079 PLEKHM1Q9Y4G2 1056 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 ST14Q9Y5Y6 855 aa17.77■□□□□ 0.44
DDX55-204ENST00000536079 PRSS38A1L453 326 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 PSMD3O43242 534 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 LDB2O43679 373 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A9O60656 530 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A6P19224 532 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A1P22309 533 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A4P22310 534 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 HTR1BP28222 390 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A3P35503 534 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A5P35504 534 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 ACTN2P35609 894 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 ZNF140P52738 457 aaPredicted RBP17.76■□□□□ 0.43
DDX55-204ENST00000536079 HNRNPKP61978 463 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX55-204ENST00000536079 TMPRSS15P98073 1019 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 SUZ12Q15022 739 aaKnown RBP17.76■□□□□ 0.43
DDX55-204ENST00000536079 CHRNA6Q15825 494 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 KHDC1Q4VXA5 237 aaKnown RBP17.76■□□□□ 0.43
DDX55-204ENST00000536079 PRRT3Q5FWE3 981 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 PPM1JQ5JR12 505 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 CERCAMQ5T4B2 595 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 DGLUCYQ7Z3D6 616 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 TRAM1L1Q8N609 369 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 OR4K2Q8NGD2 314 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 HIC2Q96JB3 615 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A7Q9HAW7 530 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A10Q9HAW8 530 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 UGT1A8Q9HAW9 530 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 CYP4F12Q9HCS2 524 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.76■□□□□ 0.43
DDX55-204ENST00000536079 FKBPLQ9UIM3 349 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 SLC17A4Q9Y2C5 497 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 SCN8AQ9UQD0 1980 aa17.76■□□□□ 0.43
DDX55-204ENST00000536079 SPEGQ15772 3267 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 TDRD6O60522 2096 aaKnown RBP17.75■□□□□ 0.43
DDX55-204ENST00000536079 CCDC78A2IDD5 438 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 AQP9O43315 295 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 RASGRP1O95267 797 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 APRTP07741 180 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 CASQ1P31415 396 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 PTGIRP43119 386 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 GRK6P43250 576 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 BASP1P80723 227 aaKnown RBP17.75■□□□□ 0.43
DDX55-204ENST00000536079 GPS1Q13098 491 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 POU6F1Q14863 301 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 DEFB133Q30KQ1 61 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 ATP13A5Q4VNC0 1218 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 CCDC38Q502W7 563 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 ANKRD22Q5VYY1 191 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 FAM151BQ6UXP7 276 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 ZNF534Q76KX8 674 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 MARK2Q7KZI7 788 aaKnown RBP17.75■□□□□ 0.43
DDX55-204ENST00000536079 SFTPA2Q8IWL1 248 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 TMEM168Q9H0V1 697 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 TOR4AQ9NXH8 423 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 MOSPD1Q9UJG1 213 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 SUFUQ9UMX1 484 aa17.75■□□□□ 0.43
DDX55-204ENST00000536079 DGKBQ9Y6T7 804 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms