RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 IYDQ6PHW0 289 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ZNF564Q8TBZ8 553 aaPredicted RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 PTCD2Q8WV60 388 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 SH3KBP1Q96B97 665 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 OR2M4Q96R27 311 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ANP32EQ9BTT0 268 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ABCG8Q9H221 673 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 HAUS4Q9H6D7 363 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 SYNDIG1Q9H7V2 258 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ETNK2Q9NVF9 386 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 CNOT8Q9UFF9 292 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 ANAPC2Q9UJX6 822 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 CNOT6Q9ULM6 557 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 B3GALT1Q9Y5Z6 326 aa11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 BZW2Q9Y6E2 419 aaKnown RBP11.15□□□□□ -0.62
CLSTN3-206ENST00000535668 MN1Q10571 1320 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 KIR2DS5A0A0G2JLQ3 304 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 A0A0G2JNG1 304 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 A0A1B0GTH6 734 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 LRRC53A6NM62 1247 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 KIR2DS3K7RE56 304 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 MATN3O15232 486 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 TEX33O43247 280 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 RARAP10276 462 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 CCNCP24863 283 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 AK4P27144 223 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 ALDH4A1P30038 563 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 CSTF2P33240 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 MAN1A1P33908 653 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 CASRP41180 1078 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 MAPK10P53779 464 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 ABHD18Q0P651 414 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 GALNT2Q10471 571 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 IHHQ14623 411 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 KIR2DS5Q14953 304 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 PAFAH1B3Q15102 231 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 DCAF12Q5T6F0 453 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 HENMT1Q5T8I9 393 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 E4F1Q66K89 784 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 HGSNATQ68CP4 663 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 LRRC66Q68CR7 880 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 VASH2Q86V25 355 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 VSIG1Q86XK7 387 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 ARRDC2Q8TBH0 407 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 DTX3LQ8TDB6 740 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 FAF2Q96CS3 445 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 AP2M1Q96CW1 435 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 RTP4Q96DX8 246 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 WDR24Q96S15 920 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 HERPUD2Q9BSE4 406 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 TDRD1Q9BXT4 1180 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 XPO4Q9C0E2 1151 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 POLR1EQ9GZS1 481 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 SEMA5BQ9P283 1151 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 ADGRG1Q9Y653 693 aa11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 PRRC2CQ9Y520 2896 aaKnown RBP11.14□□□□□ -0.63
CLSTN3-206ENST00000535668 DOPEY1Q5JWR5 2465 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 A0A1W2PQJ5 194 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 LILRA5A6NI73 299 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 CYSRT1A8MQ03 144 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ZNF891A8MT65 544 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ZNF487B1APH4 448 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 DLGAP3O95886 979 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 C9P02748 559 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PDHA1P08559 390 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC2A4P14672 509 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 CDK11BP21127 795 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 AMPD1P23109 780 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 GARSP41250 739 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ACTR1BP42025 376 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 GPR1P46091 355 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 GNPDA1P46926 289 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ACTR1AP61163 376 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 MC1RQ01726 317 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC14A2Q15849 920 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 AMZ1Q400G9 498 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 CCDC183Q5T5S1 534 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PDPK2PQ6A1A2 396 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 RAET1GQ6H3X3 334 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC30A9Q6PML9 568 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SASS6Q6UVJ0 657 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 TSPAN33Q86UF1 283 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 CACNA2D3Q8IZS8 1091 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ATPAF2Q8N5M1 289 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 AOPEPQ8N6M6 819 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 OR10G6Q8NH81 332 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SLC37A2Q8TED4 501 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 NSMCE1Q8WV22 266 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PATE1Q8WXA2 126 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 ART4Q93070 314 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PMEPA1Q969W9 287 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 IQCDQ96DY2 449 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 PCDH18Q9HCL0 1135 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 HAUS2Q9NVX0 235 aa11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 SIDT1Q9NXL6 827 aaKnown RBP11.13□□□□□ -0.63
CLSTN3-206ENST00000535668 KCNK4Q9NYG8 393 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms