RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 KIF1CO43896 1103 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 NRP2O60462 931 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 SNAP91O60641 907 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 RNASEH1O60930 286 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 CD160O95971 181 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 PSMD8P48556 350 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 ACADVLP49748 655 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 STX1BP61266 288 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 ARF5P84085 180 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 PLD1Q13393 1074 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 ARHGEF6Q15052 776 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 PTPRRQ15256 657 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.2
NEK4-207ENST00000535191 SPATA24Q86W54 205 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 PIANPQ8IYJ0 282 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 FBXO39Q8N4B4 442 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 EFHBQ8N7U6 833 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 OR9I1Q8NGQ6 314 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 DLG3Q92796 817 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 BIRC8Q96P09 236 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 BPIFA1Q9NP55 256 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 SMPD4Q9NXE4 827 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 FKBPLQ9UIM3 349 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 IKZF3Q9UKT9 509 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 SARDHQ9UL12 918 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 GREB1Q4ZG55 1949 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 CDC7O00311 574 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 MRASO14807 208 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 STX7O15400 261 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 C1RP00736 705 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 PYGLP06737 847 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 ALDOCP09972 364 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 GPX3P22352 226 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 EEF1DP29692 281 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 MC4RP32245 332 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 FOXA1P55317 472 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 CLCQ05315 142 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 TRIM25Q14258 630 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 TSNQ15631 228 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 PSAPL1Q6NUJ1 521 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 LAYNQ6UX15 382 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 FUNDC1Q8IVP5 155 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 HERC6Q8IVU3 1022 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 RNF168Q8IYW5 571 aaPredicted RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 NKAPQ8N5F7 415 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 TWIST2Q8WVJ9 160 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 TUBGCP5Q96RT8 1024 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 COPS7BQ9H9Q2 264 aaPredicted RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 PDP2Q9P2J9 529 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 VPS9D1Q9Y2B5 631 aa13.78□□□□□ -0.2
NEK4-207ENST00000535191 OAS3Q9Y6K5 1087 aaKnown RBP13.78□□□□□ -0.2
NEK4-207ENST00000535191 TET1Q8NFU7 2136 aa13.77□□□□□ -0.2
NEK4-207ENST00000535191 CAPN8A6NHC0 703 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 H0Y626 953 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 PIP5K1BO14986 540 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 PFDN6O15212 129 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 OR1I1O60431 355 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 ECI2O75521 394 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 TMCC1O94876 653 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 PKMP14618 531 aaKnown RBP13.77□□□□□ -0.21
NEK4-207ENST00000535191 TRAF2Q12933 501 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 ZRANB3Q5FWF4 1079 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 ANKS6Q68DC2 871 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 NCEH1Q6PIU2 408 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 DDIASQ8IXT1 998 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 CARNMT1Q8N4J0 409 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 ASB9Q96DX5 294 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 SLC30A3Q99726 388 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 EPS15L1Q9UBC2 864 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 HSFX1Q9UBD0 423 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 CROTQ9UKG9 612 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 FNDC3AQ9Y2H6 1198 aaKnown RBP13.77□□□□□ -0.21
NEK4-207ENST00000535191 PTGDR2Q9Y5Y4 395 aa13.77□□□□□ -0.21
NEK4-207ENST00000535191 SYCE1LA8MT33 242 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 TBL1XO60907 577 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 VPS26AO75436 327 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 CXCL10P02778 98 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 MZF1P28698 734 aaPredicted RBP13.76□□□□□ -0.21
NEK4-207ENST00000535191 TTPAP49638 278 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 ADGRE1Q14246 886 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 KIF19Q2TAC6 998 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 FBXO48Q5FWF7 155 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 KANK2Q63ZY3 851 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 TMEM126BQ8IUX1 230 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 FUBP1Q96AE4 644 aaKnown RBP13.76□□□□□ -0.21
NEK4-207ENST00000535191 KLHL32Q96NJ5 620 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 BTBD9Q96Q07 612 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 PCDHAC1Q9H158 963 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 HIPK3Q9H422 1215 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 SPATS2LQ9NUQ6 558 aaKnown RBP13.76□□□□□ -0.21
NEK4-207ENST00000535191 YIPF1Q9Y548 306 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 A0A0U1RQS6 177 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 SCAMP3O14828 347 aaKnown RBP13.76□□□□□ -0.21
NEK4-207ENST00000535191 TRIM24O15164 1050 aa13.76□□□□□ -0.21
NEK4-207ENST00000535191 MYCP01106 439 aaPredicted RBP13.76□□□□□ -0.21
NEK4-207ENST00000535191 LINC00032P0C843 101 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms