RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 MIB1Q86YT6 1006 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SLC22A9Q8IVM8 553 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 RTL3Q8N8U3 475 aaKnown RBP19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SEPHS2Q99611 448 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CSNK1G1Q9HCP0 422 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 OSER1Q9NX31 292 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CRCPO75575 148 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 GPR15P49685 360 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 PLCL1Q15111 1095 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CYP51A1Q16850 503 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 PIK3R6Q5UE93 754 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 ZNF467Q7Z7K2 595 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-226ENST00000533820 METTL23Q86XA0 190 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CMTM6Q9NX76 183 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 NOX1Q9Y5S8 564 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 ODC1P11926 461 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 ARL1P40616 181 aaPredicted RBP19.28■□□□□ 0.68
CAPN1-226ENST00000533820 POLD2P49005 469 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 UPP1Q16831 310 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 UGT3A2Q3SY77 523 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 ZNF549Q6P9A3 640 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 ERMP1Q7Z2K6 904 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CMTR2Q8IYT2 770 aaKnown RBP19.28■□□□□ 0.68
CAPN1-226ENST00000533820 CLYBLQ8N0X4 340 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 TMEM74Q96NL1 305 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 C1orf50Q9BV19 199 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SLC25A51Q9H1U9 297 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 SARDHQ9UL12 918 aa19.28■□□□□ 0.68
CAPN1-226ENST00000533820 HERVK_113P63132 956 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 CTBSQ01459 385 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 PLA2G4EQ3MJ16 856 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 OVOS1Q6IE37 1185 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 FAM45BPQ6NSW5 357 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 TIGD7Q6NT04 549 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-226ENST00000533820 KIAA0408Q6ZU52 694 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 FAM45AQ8TCE6 357 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 PTCD2Q8WV60 388 aaKnown RBP19.27■□□□□ 0.68
CAPN1-226ENST00000533820 TFAP2CQ92754 450 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 ERVK-6Q9BXR3 956 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 TUBB1Q9H4B7 451 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 TRNAU1APQ9NX07 287 aaKnown RBP19.27■□□□□ 0.68
CAPN1-226ENST00000533820 SLAMF8Q9P0V8 285 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 NDUFAF1Q9Y375 327 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 ACTL7AQ9Y615 435 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 FGF10O15520 208 aaPredicted RBP19.27■□□□□ 0.68
CAPN1-226ENST00000533820 PSMD8P48556 350 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 SEMA3AQ14563 771 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 INAQ16352 499 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 DDR2Q16832 855 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 GPR141Q7Z602 305 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 MIER2Q8N344 545 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 NUDT8Q8WV74 236 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 MS4A4AQ96JQ5 239 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 TEX37Q96LM6 180 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 SMIM14Q96QK8 99 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 HBEGFQ99075 208 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 ADI1Q9BV57 179 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 ABCC13Q9NSE7 274 aa19.27■□□□□ 0.68
CAPN1-226ENST00000533820 SUPT3HB4E1H0 165 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 M0QZ92 97 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 EI24O14681 340 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 AZIN1O14977 448 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 RCVRNP35243 200 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 CDK9P50750 372 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 PPP4R4Q6NUP7 873 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 LZTR1Q8N653 840 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 SCAIQ8N9R8 606 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ANKRD60Q9BZ19 345 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 COQ6Q9Y2Z9 468 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 GPC6Q9Y625 555 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 NYNRINQ9P2P1 1898 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ZFC3H1O60293 1989 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 UNCXA6NJT0 531 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 DLGAP1O14490 977 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 GOT2P00505 430 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 IL10P22301 178 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 PRDX3P30048 256 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ALDH3B2P48448 385 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ZNF135P52742 658 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 TGFBIQ15582 683 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ADRM1Q16186 407 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 MAGEE2Q8TD90 523 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 IMP4Q96G21 291 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 AP5M1Q9H0R1 490 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 POLR3BQ9NW08 1133 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 MYADML2A6NDP7 307 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ARPC2O15144 300 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 IGLV3-25P01717 112 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 SLC2A3P11169 496 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 DNAJB1P25685 340 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 PSMA4P25789 261 aaKnown RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 RENBPP51606 427 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 EFEMP1Q12805 493 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 BCL2A1Q16548 175 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 OTUD3Q5T2D3 398 aaPredicted RBP19.26■□□□□ 0.67
CAPN1-226ENST00000533820 TOP1MTQ969P6 601 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 ACOX2Q99424 681 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 PRELID1Q9Y255 219 aa19.26■□□□□ 0.67
CAPN1-226ENST00000533820 SH3PXD2BA1X283 911 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms