RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 GRID2O43424 1007 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 LUC7L3O95232 432 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 OLFM2O95897 454 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 RB1P06400 928 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 RHOCP08134 193 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 HMBSP08397 361 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 COX4I1P13073 169 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 LAG3P18627 525 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 IMPDH1P20839 514 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 SP100P23497 879 aaPredicted RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 VHLP40337 213 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ABCG1P45844 678 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ZNF140P52738 457 aaPredicted RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 STC1P52823 247 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 NAGLUP54802 743 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 KDSRQ06136 332 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 UBAP2LQ14157 1087 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 PABPC1LQ4VXU2 614 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 ACSBG2Q5FVE4 666 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 RBM20Q5T481 1227 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 KIAA1841Q6NSI8 718 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 RFWD3Q6PCD5 774 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 AFTPHQ6ULP2 937 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 DDX53Q86TM3 631 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 ITIH5Q86UX2 942 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 TMEM173Q86WV6 379 aaPredicted RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 MYLK4Q86YV6 388 aaPredicted RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 FAM217AQ8IXS0 508 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ULK2Q8IYT8 1036 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 MAB21L3Q8N8X9 362 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 KDM1BQ8NB78 822 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 TXNDC5Q8NBS9 432 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 OR6P1Q8NGX9 317 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 OR4L1Q8NH43 312 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 CDKN2AIPNLQ96HQ2 116 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 OLFM1Q99784 485 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 VN1R3Q9BXE9 311 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 TMEM121BQ9BXQ6 578 aaPredicted RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 NACA2Q9H009 215 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ATXN3LQ9H3M9 355 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 TFB2MQ9H5Q4 396 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 SYTL2Q9HCH5 934 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 CATSPERZQ9NTU4 200 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 CPSF2Q9P2I0 782 aaKnown RBP9.65□□□□□ -0.86
CHKA-207ENST00000533728 SSX2IPQ9Y2D8 614 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 ZNF510Q9Y2H8 683 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 YIPF1Q9Y548 306 aa9.65□□□□□ -0.86
CHKA-207ENST00000533728 A0A088AWK7 358 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 TYW5A2RUC4 315 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 NT5C1B-RDH14C9J2C7 533 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 GFRA2O00451 464 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 LIN7AO14910 233 aaPredicted RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 MUSKO15146 869 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ADAM12O43184 909 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ABCB7O75027 752 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ENTPD5O75356 428 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 F11P03951 625 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CHRNGP07510 517 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ACADSP16219 412 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 MPSTP25325 297 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CORO1AP31146 461 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 PPARGP37231 505 aaPredicted RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 AVPR1AP37288 418 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CSNK1DP48730 415 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ATP4BP51164 291 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ARSDP51689 593 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CLCN4P51793 760 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 EPHB3P54753 998 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ADARP55265 1226 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 RPL26P61254 145 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 ATP6V0D1P61421 351 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 AP2B1P63010 937 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 MXRA7P84157 204 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 SLC34A1Q06495 639 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 USP4Q13107 963 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CSHL1Q14406 222 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 KPNB1Q14974 876 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 MAPRE2Q15555 327 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 KHDC1Q4VXA5 237 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 SLC9B1Q4ZJI4 515 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 C16orf89Q6UX73 402 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CHSY3Q70JA7 882 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 DENND1CQ8IV53 801 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHKA-207ENST00000533728 HJURPQ8NCD3 748 aaPredicted RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 OR7D4Q8NG98 312 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 CEP70Q8NHQ1 597 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 MAPK15Q8TD08 544 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 TMEM169Q96HH4 297 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 TBATAQ96M53 351 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 PRICKLE1Q96MT3 831 aaPredicted RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 SERPINI1Q99574 410 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 AARSD1Q9BTE6 412 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 TDRD1Q9BXT4 1180 aaKnown RBP9.64□□□□□ -0.87
CHKA-207ENST00000533728 ADGRE3Q9BY15 652 aa9.64□□□□□ -0.87
CHKA-207ENST00000533728 LMAN2LQ9H0V9 348 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms