RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ZNF398Q8TD17 642 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 PTCD2Q8WV60 388 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 PEX13Q92968 403 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 FUBP1Q96AE4 644 aaKnown RBP11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 CDKN2AIPNLQ96HQ2 116 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 TEX101Q9BY14 249 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 ERVMER34-1Q9H9K5 563 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 CHRAC1Q9NRG0 131 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 SAMD15Q9P1V8 674 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 RIMKLBQ9ULI2 386 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 TCAF1Q9Y4C2 921 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 SNX11Q9Y5W9 270 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 VPS13AQ96RL7 3174 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 NUMA1Q14980 2115 aa11.18□□□□□ -0.62
TRAPPC4-211ENST00000533012 MYO15AQ9UKN7 3530 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 DMDP11532 3685 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 SPTY2D1-AS1A0A0U1RR47 76 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 DFNA5O60443 496 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 GFRA3O60609 400 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 SLC25A14O95258 325 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 MYCLP1P12525 358 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ENGP17813 658 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CTSKP43235 329 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ARL4CP56559 192 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CRADDP78560 199 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CDK3Q00526 305 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 GUCY2DQ02846 1103 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 GRIK2Q13002 908 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ITGA9Q13797 1035 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 NFATC4Q14934 902 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 SF3A2Q15428 464 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CHRNA6Q15825 494 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 DNAJC21Q5F1R6 531 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 TSTD2Q5T7W7 516 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ENPP7Q6UWV6 458 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 FAM151BQ6UXP7 276 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 KDM7AQ6ZMT4 941 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 HEATR4Q86WZ0 1026 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 PELI3Q8N2H9 469 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 OXR1Q8N573 874 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 DNAJC1Q96KC8 554 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 KIFC1Q9BW19 673 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 GTPBP2Q9BX10 602 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ASB8Q9H765 288 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 MRM3Q9HC36 420 aaKnown RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 EPB41L5Q9HCM4 733 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 FSCN3Q9NQT6 498 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ARGLU1Q9NWB6 273 aaPredicted RBP11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 SYBUQ9NX95 663 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 FKBPLQ9UIM3 349 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 MAD1L1Q9Y6D9 718 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 SLC30A1Q9Y6M5 507 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 THADAQ6YHU6 1953 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CACNA1HO95180 2353 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 USP34Q70CQ2 3546 aa11.17□□□□□ -0.62
TRAPPC4-211ENST00000533012 CCDC78A2IDD5 438 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 FADS2P1A8MWK0 482 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 H7C0S8 307 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 INPP4BO15327 924 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 RRP9O43818 475 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A9O60656 530 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 SRP72O76094 671 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 PRAMEF1O95521 474 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 ASMTLO95671 621 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 SOD1P00441 154 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A6P19224 532 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 ITGALP20701 1170 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A1P22309 533 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A4P22310 534 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 TGM1P22735 817 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 PSMA3P25788 255 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 MC4RP32245 332 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A3P35503 534 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 UGT1A5P35504 534 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 MAGEA3P43357 314 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 PLTPP55058 493 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 KIAA1024LP59773 190 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 XIAPP98170 497 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 BNC1Q01954 994 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 HIF1AQ16665 826 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 HLA-BQ31612 363 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 BBS9Q3SYG4 887 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 ATP13A5Q4VNC0 1218 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 FNBP1LQ5T0N5 605 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 TCEAL6Q6IPX3 200 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 MACC1Q6ZN28 852 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 SPATS2Q86XZ4 545 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 SLC22A18ASQ8N1D0 253 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 MPP5Q8N3R9 675 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 GDAP1Q8TB36 358 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 BTN2A2Q8WVV5 523 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 GLYATL1Q969I3 302 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 HDAC10Q969S8 669 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 SIGLEC10Q96LC7 697 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 TBATAQ96M53 351 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 ZNF778Q96MU6 729 aa11.16□□□□□ -0.62
TRAPPC4-211ENST00000533012 WDR92Q96MX6 357 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms