RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 CDH3P22223 829 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 GTF2A1P52655 376 aaPredicted RBP15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ANKRD33Q7Z3H0 272 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 MTDHQ86UE4 582 aaKnown RBP15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 C17orf64Q86WR6 236 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ACSS2Q9NR19 701 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ZDHHC7Q9NXF8 308 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ENTPD4Q9Y227 616 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ULK1O75385 1050 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 GRIA1P42261 906 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 AP2B1P63010 937 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 TMEM240Q5SV17 173 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 BRAT1Q6PJG6 821 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 AZIN2Q96A70 460 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 TCEAL4Q96EI5 215 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 MRPL57Q9BQC6 102 aaKnown RBP15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ANLNQ9NQW6 1124 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 TMEM248Q9NWD8 314 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 COLEC10Q9Y6Z7 277 aa15.67■□□□□ 0.1
PPFIA1-222ENST00000532504 ALAS2P22557 587 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 TLX1P31314 330 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 GRIA4P48058 902 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 BLKP51451 505 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 HNRNPH2P55795 449 aaKnown RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 NAE1Q13564 534 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 RPAINQ86UA6 219 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 TDHQ8IZJ6 230 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 GBP5Q96PP8 586 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 IGSF9Q9P2J2 1179 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 B4DGG1 531 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 FAM107AO95990 144 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 ALPPL2P10696 532 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 CDH5P33151 784 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 CYLC2Q14093 348 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 RNASEH2BQ5TBB1 312 aaKnown RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 SLC30A9Q6PML9 568 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 C2P06681 752 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 ACTN3Q08043 901 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 MAD2L1Q13257 205 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 FAM26DQ5JW98 314 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 C12orf66Q96MD2 445 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 FEM1AQ9BSK4 669 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 SLCO3A1Q9UIG8 710 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 A0A1W2PPM1 405 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 H0YGN5 161 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 LAMTOR5O43504 91 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 THRAP10827 490 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 RGS1Q08116 209 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 PTCD2Q8WV60 388 aaKnown RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 ZNF75CPQ92670 426 aaPredicted RBP15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 EFCAB1Q9HAE3 211 aa15.66■□□□□ 0.1
PPFIA1-222ENST00000532504 UPK3BL1B0FP48 263 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 UPK3BL2E5RIL1 263 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 ALDH4A1P30038 563 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 OLIG2Q13516 323 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 LRRC36Q1X8D7 754 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 CAPN13Q6MZZ7 669 aaPredicted RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 TMPRSS11BQ86T26 416 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 TXNDC5Q8NBS9 432 aaKnown RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 CDH19Q9H159 772 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 TMEM59LQ9UK28 342 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SOX13Q9UN79 622 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 MYO7AQ13402 2215 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 H3BQF6 201 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 COX7A2P14406 83 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 CD72P21854 359 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 PRKAA2P54646 552 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 RING1Q06587 406 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 ZBTB17Q13105 803 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 FGF13Q92913 245 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 HLA-CQ95604 372 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 LMLNQ96KR4 655 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 OSBPL1AQ9BXW6 950 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 ADAMTS7Q9UKP4 1686 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 A0A1W2PP55 124 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 TSHRP16473 764 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SERINC3Q13530 473 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SIRPB2Q5JXA9 342 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 TMPRSS6Q8IU80 811 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 FAM46DQ8NEK8 389 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 INPP5DQ92835 1189 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 QRFPRQ96P65 431 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 LMAN2LQ9H0V9 348 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 WDR6Q9NNW5 1121 aaKnown RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 COQ6Q9Y2Z9 468 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SSC5DA1L4H1 1573 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 LEFTY1O75610 366 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 ERAL1O75616 437 aaKnown RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 ABHD2P08910 425 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 MSLNQ13421 630 aaPredicted RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 PIK3R6Q5UE93 754 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 HORMAD1Q86X24 394 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SIDT2Q8NBJ9 832 aaKnown RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 CLP1Q92989 425 aaKnown RBP15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 SLC2A13Q96QE2 648 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 AGAP2Q99490 1192 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 FANCEQ9HB96 536 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 CCDC167Q9P0B6 97 aa15.65■□□□□ 0.1
PPFIA1-222ENST00000532504 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms