RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 CA14Q9ULX7 337 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 POLR1DQ9Y2S0 133 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF780BQ9Y6R6 833 aa11.27□□□□□ -0.61
PTPRK-221ENST00000532331 PLCH1Q4KWH8 1693 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PRAMEF1O95521 474 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PIK3R1P27986 724 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GNPDA1P46926 289 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CTBP1Q13363 440 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 INTS11Q5TA45 600 aaKnown RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CYP2R1Q6VVX0 501 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 STK32CQ86UX6 486 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PPP3R2Q96LZ3 170 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CDCA3Q99618 268 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 OSBPL6Q9BZF3 934 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CEP44Q9C0F1 390 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 WDR26Q9H7D7 661 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ADAM30Q9UKF2 790 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 H3BN98 237 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PPEF2O14830 753 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PEX1O43933 1283 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 VNN1O95497 513 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 TNFP01375 233 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SHBGP04278 402 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 UMPSP11172 480 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 NOMO1Q15155 1222 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GDPD4Q6W3E5 623 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.26□□□□□ -0.613e-7■■■■■ 27
PTPRK-221ENST00000532331 LUZP2Q86TE4 346 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 DAW1Q8N136 415 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SVOPQ8N4V2 548 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 DEPDC7Q96QD5 511 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 C9orf16Q9BUW7 83 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 FZD10Q9ULW2 581 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ULK1O75385 1050 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PROCP04070 461 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ITGA2BP08514 1039 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PAICSP22234 425 aaKnown RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 MAGEA11P43364 429 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GRIA4P48058 902 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 KRR1Q13601 381 aaKnown RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SQLEQ14534 574 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ARCQ7LC44 396 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 BRSK1Q8TDC3 778 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 REXO5Q96IC2 774 aaKnown RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 RSPH9Q9H1X1 276 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 DMAC2Q9NW81 257 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ZSCAN32Q9NX65 697 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF232Q9UNY5 417 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 A0A0U1RQJ8 604 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SLC28A1O00337 649 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 RANBP1P43487 201 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 MREGQ8N565 214 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ZBTB2Q8N680 514 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GPR156Q8NFN8 814 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 KCTD4Q8WVF5 259 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 OTUB2Q96DC9 234 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 TBCDQ9BTW9 1192 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SLC2A4RGQ9NR83 387 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 FFAR3O14843 346 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CLOCKO15516 846 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GPR42O15529 346 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 LRCH4O75427 683 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PDE5AO76074 875 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 CBX6O95503 412 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 OTCP00480 354 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SLC9A5Q14940 896 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 LDLRAP1Q5SW96 308 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 UBXN11Q5T124 520 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 PIWIL4Q7Z3Z4 852 aaKnown RBP11.26□□□□□ -0.61
PTPRK-221ENST00000532331 POMGNT2Q8NAT1 580 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 DDHD1Q8NEL9 900 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 OVCA2Q8WZ82 227 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ANKRD27Q96NW4 1050 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 GBA3Q9H227 469 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 SRMSQ9H3Y6 488 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ACSS3Q9H6R3 686 aa11.26□□□□□ -0.61
PTPRK-221ENST00000532331 ERAL1O75616 437 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 KRT33AO76009 404 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 RECQL5O94762 991 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 JAK1P23458 1154 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 HNRNPDQ14103 355 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PYROXD2Q8N2H3 581 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 C2orf73Q8N5S3 287 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PHOSPHO2Q8TCD6 241 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PCYT2Q99447 389 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PTPN18Q99952 460 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 SMG9Q9H0W8 520 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ARFGEF2Q9Y6D5 1785 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 C9IYK1 514 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 BANF1O75531 89 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 VAV1P15498 845 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PSMB9P28065 219 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ACTR1BP42025 376 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms