RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 FAM72BQ86X60 149 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 HERC6Q8IVU3 1022 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 IFT20Q8IY31 132 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SCML4Q8N228 414 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TEX9Q8N6V9 391 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PQLC3Q8N755 202 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 PLD5Q8N7P1 536 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ANKS4BQ8N8V4 417 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 GLIS1Q8NBF1 620 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 GLB1L3Q8NCI6 653 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 GABPB2Q8TAK5 448 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 ACTL9Q8TC94 416 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 AENQ8WTP8 325 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 GAB3Q8WWW8 586 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 HERVK_113Q902F9 699 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 RUBCNQ92622 972 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 CASP10Q92851 521 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 NT5C3BQ969T7 300 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ARL8AQ96BM9 186 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAF2Q96CS3 445 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ZC3H10Q96K80 434 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 RNF157Q96PX1 679 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 NCAPGQ9BPX3 1015 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 LBHD1Q9BQE6 289 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 ERP44Q9BS26 406 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TMEM121Q9BTD3 319 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ADI1Q9BV57 179 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MAK16Q9BXY0 300 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 ZBP1Q9H171 429 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 MYLK2Q9H1R3 596 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FBXO44Q9H4M3 255 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 LRRC19Q9H756 370 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 CARS2Q9HA77 564 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 RXFP1Q9HBX9 757 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ALG13Q9NP73 1137 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 IL37Q9NZH6 218 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 CWC15Q9P013 229 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 CPSF2Q9P2I0 782 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 ASIC3Q9UHC3 531 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 TBK1Q9UHD2 729 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FAM153AQ9UHL3 310 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 RASAL2Q9UJF2 1139 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 SCML2Q9UQR0 700 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ZNF148Q9UQR1 794 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 ITM2BQ9Y287 266 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 UTP11Q9Y3A2 253 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 MAGED1Q9Y5V3 778 aaPredicted RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 SNX13Q9Y5W8 968 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 OAS3Q9Y6K5 1087 aaKnown RBP4.24□□□□□ -1.73
CD44-226ENST00000527889 HEATR5BQ9P2D3 2071 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 FANCMQ8IYD8 2048 aa4.24□□□□□ -1.73
CD44-226ENST00000527889 COL4A3Q01955 1670 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 SCN2AQ99250 2005 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 A0A0A6YYJ9 748 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TRIM64A6NGJ6 449 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 LRRC14BA6NHZ5 514 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TRIM64BA6NI03 449 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 APOC4-APOC2K7ER74 178 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 SGK1O00141 431 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 EEF2KO00418 725 aaKnown RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 PRRG1O14668 218 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 APOL1O14791 398 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 MCF2LO15068 1137 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TEX28O15482 410 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 PHGDHO43175 533 aaKnown RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 IRAK2O43187 625 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 E2F6O75461 281 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 RTN3O95197 1032 aaPredicted RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 CXCL14O95715 111 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TBX18O95935 607 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 AGR2O95994 175 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 GAS8O95995 478 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 IFNB1P01574 187 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 IGLV3-25P01717 112 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 APOC2P02655 101 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 CNPP09543 421 aaKnown RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 ZSCAN5DPP0CG00 497 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 RARGP13631 454 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 MCM3P25205 808 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 DNAJB1P25685 340 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 ADRA1BP35368 520 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 CD96P40200 585 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 ARL4AP40617 200 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 MAGEA10P43363 369 aaPredicted RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 CXCR3P49682 368 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 IRAK1P51617 712 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 PLTPP55058 493 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TPI1P60174 286 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 RPL10AP62906 217 aaKnown RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 NKX6-1P78426 367 aaPredicted RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 GBE1Q04446 702 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 PRKCQQ04759 706 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 SCAPQ12770 1279 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 TWF1Q12792 350 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 SMARCB1Q12824 385 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 SLC10A2Q12908 348 aaPredicted RBP4.23□□□□□ -1.73
CD44-226ENST00000527889 GPS1Q13098 491 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 CUL1Q13616 776 aa4.23□□□□□ -1.73
CD44-226ENST00000527889 PTK6Q13882 451 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms