RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GALNT13Q8IUC8 556 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 NRSN1Q8IZ57 195 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 CCNYQ8ND76 341 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 FAM71BQ8TC56 605 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 LRRN4Q8WUT4 740 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 JPH3Q8WXH2 748 aaPredicted RBP22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 IQCDQ96DY2 449 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 AHCYL2Q96HN2 611 aaKnown RBP22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 CCDC74BQ96LY2 380 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 AGAP2Q99490 1192 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 FUCA2Q9BTY2 467 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 RIOK2Q9BVS4 552 aaKnown RBP22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 DNPEPQ9ULA0 475 aa22.26■■□□□ 1.15
TRAPPC4-208ENST00000527680 HGSO14964 777 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 CLDN7O95471 211 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 SOD1P00441 154 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 MPSTP25325 297 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 CD82P27701 267 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 CSTF2P33240 577 aaKnown RBP eCLIP22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 PBX1P40424 430 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 ARSEP51690 589 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 LIMK2P53671 638 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 NR1D2Q14995 579 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 PYCR3Q53H96 274 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 ZNF765Q7L2R6 523 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 NLRP8Q86W28 1048 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 LPCAT1Q8NF37 534 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 MAML1Q92585 1016 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 EXTL1Q92935 676 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 SCARF2Q96GP6 870 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 TAAR9Q96RI9 348 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 PIEZO2Q9H5I5 2752 aa22.25■■□□□ 1.15
TRAPPC4-208ENST00000527680 MX2P20592 715 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 STC1P52823 247 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 EXD3Q8N9H8 876 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 CCDC112Q8NEF3 446 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 OR4D9Q8NGE8 314 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 TSGA13Q96PP4 275 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 SLC38A3Q99624 504 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 TDRD1Q9BXT4 1180 aaKnown RBP22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 PCDH9Q9HC56 1237 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 AMACRQ9UHK6 382 aa22.24■■□□□ 1.15
TRAPPC4-208ENST00000527680 IGHV1OR21-1A0A087WYE8 117 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 SLC28A2O43868 658 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 PROSCO94903 275 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 ATP1A1P05023 1023 aaKnown RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 KRT7P08729 469 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 FGF3P11487 239 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 NFATC3Q12968 1075 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 TRA2AQ13595 282 aaKnown RBP eCLIP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 CHST15Q7LFX5 561 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 ZNF761Q86XN6 746 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 DTX1Q86Y01 620 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 CPNE8Q86YQ8 564 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 AGBL5Q8NDL9 886 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 CCHCR1Q8TD31 782 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 CTNNBL1Q8WYA6 563 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 DPYSL5Q9BPU6 564 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 ZNF670Q9BS34 389 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 FAM117AQ9C073 453 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 B3GNT4Q9C0J1 378 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 IFNKQ9P0W0 207 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 PRKAB1Q9Y478 270 aa22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 HEMK1Q9Y5R4 338 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-208ENST00000527680 CFAP46Q8IYW2 2715 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 C1orf232A0A0U1RR37 186 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 STMND1H3BQB6 276 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 PRLP01236 227 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 JCHAINP01591 159 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ITGB2P05107 769 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 HLA-DQB2P05538 268 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 H2AFZP0C0S5 128 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 RPL26P61254 145 aaKnown RBP22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 NIPAL4Q0D2K0 466 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 LRP8Q14114 963 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 IHHQ14623 411 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 LINC00303Q3SY05 128 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ALG1LQ6GMV1 187 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 XKR5Q6UX68 686 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 H2AFVQ71UI9 128 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 PRICKLE2Q7Z3G6 844 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 OR10G6Q8NH81 332 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ARRDC2Q8TBH0 407 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ART4Q93070 314 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ZNF830Q96NB3 372 aaPredicted RBP22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 MLPHQ9BV36 600 aaPredicted RBP22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 FAM83DQ9H4H8 585 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 SLC39A1Q9NY26 324 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 UVRAGQ9P2Y5 699 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 RPL26L1Q9UNX3 145 aaKnown RBP22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 PCDHGA4Q9Y5G9 962 aa22.22■■□□□ 1.15
TRAPPC4-208ENST00000527680 ZFC3H1O60293 1989 aaKnown RBP22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 CASP14P31944 242 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 ATP1A2P50993 1020 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 TAS2R40P59535 323 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 CYP4F2P78329 520 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 GPLD1P80108 840 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 GBE1Q04446 702 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 SQSTM1Q13501 440 aa22.21■■□□□ 1.15
TRAPPC4-208ENST00000527680 SNAP47Q5SQN1 464 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms