RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 GRB7Q14451 532 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TCTN1Q2MV58 587 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 SLC36A3Q495N2 470 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF678Q5SXM1 525 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TMTC4Q5T4D3 741 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PM20D1Q6GTS8 502 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 PRMT9Q6P2P2 845 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 KIAA0408Q6ZU52 694 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF354CQ86Y25 554 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 SEPT8Q92599 483 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 BORCS5Q969J3 196 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 SEPHS2Q99611 448 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TRMOQ9BU70 441 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 NAA50Q9GZZ1 169 aaKnown RBP12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TMEM30AQ9NV96 361 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 CMTM6Q9NX76 183 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 ATP11BQ9Y2G3 1177 aa12.48□□□□□ -0.41
CAPN1-208ENST00000527323 TRIOO75962 3097 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 H3BMQ9 156 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PTGESO14684 152 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PIP5K1BO14986 540 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ARPC2O15144 300 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 SIX3O95343 332 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 MOCS2O96007 188 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 LINC00032P0C843 101 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 KCNE1P15382 129 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 CAPN3P20807 821 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 MAP4P27816 1152 aaKnown RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF135P52742 658 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 SH3BP2P78314 561 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 SFSWAPQ12872 951 aaKnown RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 TRAF2Q12933 501 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 UNC50Q53HI1 259 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 RAB44Q7Z6P3 723 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PIM3Q86V86 326 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PTGR2Q8N8N7 351 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 TRPV3Q8NET8 790 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PGAP3Q96FM1 320 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF419Q96HQ0 510 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 VPS50Q96JG6 964 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 SLC45A3Q96JT2 553 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 MRGPRX2Q96LB1 330 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 COG8Q96MW5 612 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 TMEM165Q9HC07 324 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ZNHIT2Q9UHR6 403 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 BTRCQ9Y297 605 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 TRPV2Q9Y5S1 764 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 DNAJC15Q9Y5T4 150 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 LRRC14BA6NHZ5 514 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 CACNG3O60359 315 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 MAFKO60675 156 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 CBFA2T3O75081 653 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ZBTB11O95625 1053 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 HGFP14210 728 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 UGT1A1P22309 533 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 UGT1A4P22310 534 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 TTKP33981 857 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 UGT1A3P35503 534 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 UGT1A5P35504 534 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ATP4BP51164 291 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 BNIP2Q12982 314 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 NFYCQ13952 458 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 OTUD3Q5T2D3 398 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 GRAMD4Q6IC98 578 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 C8orf82Q6P1X6 216 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 RANBP10Q6VN20 620 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 CYHR1Q6ZMK1 362 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 RTN4RL1Q86UN2 441 aaPredicted RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 LRRC58Q96CX6 371 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 FEM1CQ96JP0 617 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 COX4I2Q96KJ9 171 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 IL12RB2Q99665 862 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ACTR3BQ9P1U1 418 aa12.47□□□□□ -0.41
CAPN1-208ENST00000527323 PAIP2BQ9ULR5 123 aaKnown RBP12.47□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF701M0R085 212 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 OCM2P0CE71 109 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 OCMP0CE72 109 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 CAPGP40121 348 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 CDKN2DP55273 166 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 YBX1P67809 324 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 CDC42EP1Q00587 391 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ATP1A4Q13733 1029 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 PFKFB4Q16877 469 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ZNF829Q3KNS6 432 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 AGMOQ6ZNB7 445 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ISCA2Q86U28 154 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ARHGAP12Q8IWW6 846 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ADGRG5Q8IZF4 528 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ZBTB8BQ8NAP8 495 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 DBF4BQ8NFT6 615 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 TWIST2Q8WVJ9 160 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 NDFIP2Q9NV92 336 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 SMPD3Q9NY59 655 aaPredicted RBP12.46□□□□□ -0.41
CAPN1-208ENST00000527323 OR51F1A6NGY5 319 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 ARL5CA6NH57 179 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 AZIN1O14977 448 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 GFAPP14136 432 aa12.46□□□□□ -0.41
CAPN1-208ENST00000527323 SLC6A2P23975 617 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms