RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PKD2L2Q9NZM6 624 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 TMEM216Q9P0N5 145 aa20.42■□□□□ 0.86
SMCO4-203ENST00000526869 AGAP14A8MT82 685 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 C2CD4DB7Z1M9 353 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 KLHL2O95198 593 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 TOP3BO95985 862 aaKnown RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 C1SP09871 688 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 CHRM1P11229 460 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 HLA-EP13747 358 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 SAT1P21673 171 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 MMP12P39900 470 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 GALK1P51570 392 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 IRF9Q00978 393 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 NFATC2Q13469 925 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 EGFLAMQ63HQ2 1017 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 PARS2Q7L3T8 475 aaKnown RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 TBC1D1Q86TI0 1168 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 CENPLQ8N0S6 344 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 PLD6Q8N2A8 252 aaKnown RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 PIP4K2CQ8TBX8 421 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 KCNV2Q8TDN2 545 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 FAM129BQ96TA1 746 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 CCDC68Q9H2F9 335 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 C8orf33Q9H7E9 229 aaPredicted RBP20.41■□□□□ 0.86
SMCO4-203ENST00000526869 CRYL1Q9Y2S2 319 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 PCDHB1Q9Y5F3 818 aa20.41■□□□□ 0.86
SMCO4-203ENST00000526869 C1QTNF3-AMACRE9PGA6 284 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 SPECC1L-ADORA2AF8WAN1 911 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 PSMD11O00231 422 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 KPNA3O00505 521 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-203ENST00000526869 IL1BP01584 269 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 ESR1P03372 595 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 PRSS56P0CW18 603 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 KCNA5P22460 613 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 RPS3P23396 243 aaKnown RBP eCLIP20.4■□□□□ 0.86
SMCO4-203ENST00000526869 CTHP32929 405 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 SPINT3P49223 89 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 CDKN2DP55273 166 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 C16orf46Q6P387 395 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 FAM151BQ6UXP7 276 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 TAS2R42Q7RTR8 314 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 RALGPS2Q86X27 583 aaPredicted RBP20.4■□□□□ 0.86
SMCO4-203ENST00000526869 GPR26Q8NDV2 337 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 ULK4Q96C45 1275 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 GRAMD1AQ96CP6 724 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 ASB8Q9H765 288 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 MANSC1Q9H8J5 431 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 NMRAL1Q9HBL8 299 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 PRSS16Q9NQE7 514 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 STON1Q9Y6Q2 735 aa20.4■□□□□ 0.86
SMCO4-203ENST00000526869 TCF20Q9UGU0 1960 aaKnown RBP20.39■□□□□ 0.86
SMCO4-203ENST00000526869 UBA6A0AVT1 1052 aaPredicted RBP20.39■□□□□ 0.85
SMCO4-203ENST00000526869 H0Y858 1186 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 EPHX1P07099 455 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 PKMP14618 531 aaKnown RBP20.39■□□□□ 0.85
SMCO4-203ENST00000526869 SOX9P48436 509 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 CDKN1CP49918 316 aaPredicted RBP20.39■□□□□ 0.85
SMCO4-203ENST00000526869 ELP6Q0PNE2 266 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 RALGDSQ12967 914 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 ITIH4Q14624 930 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 CHRNA6Q15825 494 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 FAM83EQ2M2I3 478 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 FAM46CQ5VWP2 391 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 ATG16L1Q676U5 607 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 TTC7BQ86TV6 843 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 SERPINA9Q86WD7 417 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 NUDCD3Q8IVD9 361 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 RBFAQ8N0V3 343 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 PNPLA1Q8N8W4 532 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 ZNF398Q8TD17 642 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 KCTD4Q8WVF5 259 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 ARRDC3Q96B67 414 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 MSANTD3Q96H12 275 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 UBXN10Q96LJ8 280 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 GPR78Q96P69 363 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 PHF7Q9BWX1 381 aaPredicted RBP20.39■□□□□ 0.85
SMCO4-203ENST00000526869 HDAC8Q9BY41 377 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 P2RY12Q9H244 342 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 GPAMQ9HCL2 828 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 FBRSL1Q9HCM7 1045 aaKnown RBP20.39■□□□□ 0.85
SMCO4-203ENST00000526869 TAS2R13Q9NYV9 303 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 COPG2Q9UBF2 871 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 SARDHQ9UL12 918 aa20.39■□□□□ 0.85
SMCO4-203ENST00000526869 WDR91A4D1P6 747 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 GOLGA8CPA6NN73 597 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 A8MX80 341 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 K7EQS6 105 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 PRMT5O14744 637 aaPredicted RBP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 LTA4HP09960 611 aaKnown RBP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 CPA3P15088 417 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 ZNF7P17097 686 aaPredicted RBP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 ACRV1P26436 265 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 KIR2DL1P43626 348 aaPredicted RBP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 TIAL1Q01085 375 aaKnown RBP eCLIP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 CAMK2GQ13555 558 aaPredicted RBP20.38■□□□□ 0.85
SMCO4-203ENST00000526869 ITGA9Q13797 1035 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 ZNF460Q14592 562 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 PCLAFQ15004 111 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 AGAP9Q5VTM2 703 aa20.38■□□□□ 0.85
SMCO4-203ENST00000526869 NXPE1Q8N323 547 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms