RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 AURKCQ9UQB9 309 aa11.63□□□□□ -0.55
LINC01001-201ENST00000526704 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
LINC01001-201ENST00000526704 SQORQ9Y6N5 450 aa11.63□□□□□ -0.55
LINC01001-201ENST00000526704 FAM149AA5PLN7 773 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 ARPC2O15144 300 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 CLASP2O75122 1294 aaKnown RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 COQ9O75208 318 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 RPP40O75818 363 aaKnown RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 PLOD1Q02809 727 aaPredicted RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 IL10RBQ08334 325 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 EFEMP1Q12805 493 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 BNIP2Q12982 314 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 DDR2Q16832 855 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 RAP1GAP2Q684P5 730 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 FBXL22Q6P050 247 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 RAB44Q7Z6P3 723 aaPredicted RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 AARSD1Q9BTE6 412 aaKnown RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 CLK4Q9HAZ1 481 aaKnown RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 CATSPERZQ9NTU4 200 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 IKZF3Q9UKT9 509 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 BMP10O95393 424 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 FGF1P05230 155 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 LINC00032P0C843 101 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 PIRTP0C851 137 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 HGFP14210 728 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 AKR1A1P14550 325 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 HOXB8P17481 243 aaPredicted RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 LBPP18428 481 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 ACVRL1P37023 503 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 APLP1P51693 650 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 STC1P52823 247 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 INPP5AQ14642 412 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 GNASQ5JWF2 1037 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 MRNIPQ6NTE8 343 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 LPCAT2Q7L5N7 544 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 ADGRG5Q8IZF4 528 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 GAB3Q8WWW8 586 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 TUBGCP3Q96CW5 907 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 LRRC58Q96CX6 371 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 FEM1CQ96JP0 617 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 TFB2MQ9H5Q4 396 aaKnown RBP11.62□□□□□ -0.55
LINC01001-201ENST00000526704 ACTR3BQ9P1U1 418 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 SLC8A2Q9UPR5 921 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 PCDHA9Q9Y5H5 950 aa11.62□□□□□ -0.55
LINC01001-201ENST00000526704 ASPDHA6ND91 283 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 TRIM64CA6NLI5 447 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 KERAO60938 352 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 TBX18O95935 607 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 GFAPP14136 432 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 HLA-DPA1P20036 260 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 OGNP20774 298 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 MYF6P23409 242 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PAX3P23760 479 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PSMA4P25789 261 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 EEF1DP29692 281 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 GRK4P32298 578 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 THPOP40225 353 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 SERINC3Q13530 473 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 POLD3Q15054 466 aaPredicted RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ATP6AP1Q15904 470 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 TYSND1Q2T9J0 566 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 KCTD21Q4G0X4 260 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 SETMARQ53H47 684 aaPredicted RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 COQ5Q5HYK3 327 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 BLOC1S3Q6QNY0 202 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PEX13Q92968 403 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 MYEOVQ96EZ4 313 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 MYRFLQ96LU7 910 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ADAM2Q99965 735 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ADI1Q9BV57 179 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 LIN28AQ9H9Z2 209 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 MED16Q9Y2X0 877 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 GPR45Q9Y5Y3 372 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 SUPT3HB4E1H0 165 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 TPST1O60507 370 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 RAMP2O60895 175 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 DUSP11O75319 330 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 SUPT3HO75486 399 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 MAGEA8P43361 318 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ZFP36L2P47974 494 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 CCT8P50990 548 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 EMP3P54852 163 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 DIO3P55073 304 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 CLCQ05315 142 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 FOXM1Q08050 763 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 LCP2Q13094 533 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 FBXO48Q5FWF7 155 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 CAMK1DQ8IU85 385 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ERI1Q8IV48 349 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 CMTR2Q8IYT2 770 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 ATP6V0D2Q8N8Y2 350 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 GOLM1Q8NBJ4 401 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 OR4L1Q8NH43 312 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 TMEM125Q96AQ2 219 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 BTN2A3PQ96KV6 586 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PHF12Q96QT6 1004 aa11.61□□□□□ -0.55
LINC01001-201ENST00000526704 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
LINC01001-201ENST00000526704 PREBQ9HCU5 417 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms