RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 WDR45BQ5MNZ6 344 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 UBAP2Q5T6F2 1119 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 HENMT1Q5T8I9 393 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 ZC3H14Q6PJT7 736 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 ZNF765Q7L2R6 523 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 NLRP9Q7RTR0 991 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 CYP2U1Q7Z449 544 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 TRIM74Q86UV6 250 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 UNC5BQ8IZJ1 945 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 PNPLA1Q8N8W4 532 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 OR6P1Q8NGX9 317 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 PTCD2Q8WV60 388 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 PIGKQ92643 395 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 ATOH1Q92858 354 aaPredicted RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 CENPTQ96BT3 561 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 CDKN2AIPNLQ96HQ2 116 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 LENG8Q96PV6 779 aaPredicted RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 C1QTNF7Q9BXJ2 289 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 FAM129AQ9BZQ8 928 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 UGT1A7Q9HAW7 530 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 UGT1A10Q9HAW8 530 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 UGT1A8Q9HAW9 530 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 IL26Q9NPH9 171 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 TREX1Q9NSU2 369 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 ZC3H7BQ9UGR2 993 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
CD44-224ENST00000526669 DMDP11532 3685 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 PCDH15Q96QU1 1955 aa13.65□□□□□ -0.22
CD44-224ENST00000526669 PRAMEF26H0Y7S4 382 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 FPGTO14772 594 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PRAMEF1O95521 474 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 SOD1P00441 154 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 GOT2P00505 430 aaKnown RBP13.64□□□□□ -0.23
CD44-224ENST00000526669 F7P08709 466 aaPredicted RBP13.64□□□□□ -0.23
CD44-224ENST00000526669 TNFRSF8P28908 595 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 HADHAP40939 763 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 MAGEA4P43358 317 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 CDKN1CP49918 316 aaPredicted RBP13.64□□□□□ -0.23
CD44-224ENST00000526669 DCDC1P59894 354 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 TUBB4BP68371 445 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 INPP5AQ14642 412 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 CRYMQ14894 314 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 AGERQ15109 404 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 ATP13A5Q4VNC0 1218 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PNCKQ6P2M8 343 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 UNC5AQ6ZN44 842 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 TRAM1L1Q8N609 369 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 OTUD6BQ8N6M0 293 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 DENND6BQ8NEG7 585 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PYROXD1Q8WU10 500 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 ASB12Q8WXK4 309 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 LRRC39Q96DD0 335 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 ZC3H10Q96K80 434 aaKnown RBP13.64□□□□□ -0.23
CD44-224ENST00000526669 PLEKHG4BQ96PX9 1271 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PRRX2Q99811 253 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PARD6BQ9BYG5 372 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 FOXP3Q9BZS1 431 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 ASB8Q9H765 288 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 PLAC1Q9HBJ0 212 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 TM9SF3Q9HD45 589 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 RAD18Q9NS91 495 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 RIMKLBQ9ULI2 386 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 DMTF1Q9Y222 760 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 OR1A2Q9Y585 309 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 SLC30A1Q9Y6M5 507 aa13.64□□□□□ -0.23
CD44-224ENST00000526669 ZCWPW2A0A1B0GU75 182 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 RGSL1A5PLK6 1076 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 SRP72O76094 671 aaKnown RBP13.63□□□□□ -0.23
CD44-224ENST00000526669 USP1O94782 785 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 VAPBO95292 243 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 WNT1P04628 370 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 POLBP06746 335 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 ARNTP27540 789 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 SSTR1P30872 391 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 FOXN2P32314 431 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 PTPN5P54829 565 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 ACVR1Q04771 509 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 DPTQ07507 201 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 STAT4Q14765 748 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 CCDC6Q16204 474 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 SPANXN3Q5MJ09 141 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 ZNF648Q5T619 568 aaPredicted RBP13.63□□□□□ -0.23
CD44-224ENST00000526669 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 KIAA0930Q6ICG6 404 aaPredicted RBP13.63□□□□□ -0.23
CD44-224ENST00000526669 PSAPL1Q6NUJ1 521 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 DOK6Q6PKX4 331 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 AFTPHQ6ULP2 937 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 CCNI2Q6ZMN8 369 aaPredicted RBP13.63□□□□□ -0.23
CD44-224ENST00000526669 TAS2R42Q7RTR8 314 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 HEATR4Q86WZ0 1026 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 PALM2Q8IXS6 379 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 TMEM145Q8NBT3 493 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
CD44-224ENST00000526669 OR13H1Q8NG92 308 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 DNASE2BQ8WZ79 361 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 RUBCNQ92622 972 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 BMFQ96LC9 184 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 ZSCAN5AQ9BUG6 496 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 APOOQ9BUR5 198 aa13.63□□□□□ -0.23
CD44-224ENST00000526669 CDC42EP4Q9H3Q1 356 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms