RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 PAX3P23760 479 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 SERPINB3P29508 390 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 LRPAP1P30533 357 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 SUMO3P55854 103 aaPredicted RBP7.15□□□□□ -1.26
NEDD8-203ENST00000524927 CNGA2Q16280 664 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 EFL1Q7Z2Z2 1120 aaKnown RBP7.15□□□□□ -1.26
NEDD8-203ENST00000524927 TMPRSS9Q7Z410 1059 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 TMEM25Q86YD3 366 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 STKLD1Q8NE28 680 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 CHDHQ8NE62 594 aaPredicted RBP7.15□□□□□ -1.26
NEDD8-203ENST00000524927 ZFP28Q8NHY6 868 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 TFAP2CQ92754 450 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 NDC1Q9BTX1 674 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 C2orf40Q9H1Z8 148 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 GSTO2Q9H4Y5 243 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 CPNE7Q9UBL6 633 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 PISDQ9UG56 409 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 ZDHHC8Q9ULC8 765 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 DMTF1Q9Y222 760 aa7.15□□□□□ -1.26
NEDD8-203ENST00000524927 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.26
NEDD8-203ENST00000524927 EME2A4GXA9 379 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 NPEPPSL1A6NEC2 478 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 NEMP2A6NFY4 417 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 C10orf142B7Z368 130 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 STMND1H3BQB6 276 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 NKX2-8O15522 239 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 MFAP3LO75121 409 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 SLC43A1O75387 559 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 CBX6O95503 412 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 CISD3P0C7P0 127 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 ODC1P11926 461 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 COX6B1P14854 86 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 LIFP15018 202 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 PRIM2P49643 509 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 CCR5P51681 352 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 CDH8P55286 799 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 FMO1Q01740 532 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 PLP2Q04941 152 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 TRDNQ13061 729 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 TTC31Q49AM3 519 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 ATXN7L2Q5T6C5 722 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 NUGGCQ68CJ6 796 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 BIVMQ86UB2 503 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 SKAP1Q86WV1 359 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 DCP1BQ8IZD4 617 aaKnown RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 FAM9BQ8IZU0 186 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 EXOC6Q8TAG9 804 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 UCMAQ8WVF2 138 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 TMEM159Q96B96 161 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 SLC45A3Q96JT2 553 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 SERAC1Q96JX3 654 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 ARPC5LQ9BPX5 153 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 EPB41L5Q9HCM4 733 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 SMPD4Q9NXE4 827 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 PLA2G3Q9NZ20 509 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 FOXJ2Q9P0K8 574 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 WDR35Q9P2L0 1181 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 WRAP73Q9P2S5 460 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 RPH3AQ9Y2J0 694 aaPredicted RBP7.14□□□□□ -1.27
NEDD8-203ENST00000524927 DUSP10Q9Y6W6 482 aa7.14□□□□□ -1.27
NEDD8-203ENST00000524927 CPED1A4D0V7 1026 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 MYO1FO00160 1098 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 FOXN3O00409 490 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 MATN4O95460 622 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 DNTTP04053 509 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 HGFP14210 728 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 PPP3CCP48454 512 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 PSMC1P62191 440 aaKnown RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 CDC20Q12834 499 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 ART3Q13508 389 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 ELAVL1Q15717 326 aaKnown RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 CDKN3Q16667 212 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 SDHAF4Q5VUM1 108 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 NAPEPLDQ6IQ20 393 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 GUSBP11Q6P575 273 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 DOK3Q7L591 496 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 ELOA2Q8IYF1 753 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 VPS37AQ8NEZ2 397 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 OR6B3Q8NGW1 331 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 ST8SIA2Q92186 375 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 NDRG1Q92597 394 aaKnown RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 POLR3FQ9H1D9 316 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 MEGF9Q9H1U4 602 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 C6orf50Q9HD87 102 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 CHST11Q9NPF2 352 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.13□□□□□ -1.27
NEDD8-203ENST00000524927 SACM1LQ9NTJ5 587 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 BARHL2Q9NY43 387 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 TRPM5Q9NZQ8 1165 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 JKAMPQ9P055 326 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 LRWD1Q9UFC0 647 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 SCN8AQ9UQD0 1980 aa7.13□□□□□ -1.27
NEDD8-203ENST00000524927 TLN2Q9Y4G6 2542 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 FAM47DPA6NHR8 397 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 LRRC72A6NJI9 287 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 RASA4BC9J798 803 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 K7ESM1 405 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 HIP1O00291 1037 aa7.12□□□□□ -1.27
NEDD8-203ENST00000524927 NTN3O00634 580 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms