RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 ALBP02768 609 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 HLA-DQB2P05538 268 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 LIPEQ05469 1076 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 FOXM1Q08050 763 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 NFYCQ13952 458 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 ZIK1Q3SY52 487 aaPredicted RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 FUT11Q495W5 492 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 RANBP10Q6VN20 620 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 LDB1Q86U70 411 aaPredicted RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 ARHGAP12Q8IWW6 846 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 TOP6BLQ8N6T0 577 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SMG8Q8ND04 991 aaKnown RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 PAPD5Q8NDF8 572 aaKnown RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 CALML6Q8TD86 181 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SH3RF2Q8TEC5 729 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 KCNA7Q96RP8 456 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SEPHS2Q99611 448 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 CNGB3Q9NQW8 809 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 MRPL42Q9Y6G3 142 aaKnown RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 MATN4O95460 622 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 HGFP14210 728 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 JUNBP17275 347 aaPredicted RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 BLOC1S3Q6QNY0 202 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 GPR142Q7Z601 462 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SAPCD2Q86UD0 394 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 PIM3Q86V86 326 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 IGFN1Q86VF2 1251 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 DCP1BQ8IZD4 617 aaKnown RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SFRP1Q8N474 314 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 PDPRQ8NCN5 879 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 PTERQ96BW5 349 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 TUBGCP3Q96CW5 907 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 CSF3RQ99062 836 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 TRIM54Q9BYV2 358 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SIK2Q9H0K1 926 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SLC52A3Q9NQ40 469 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 CRTAC1Q9NQ79 661 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 SDR39U1Q9NRG7 319 aaPredicted RBP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 RBM22Q9NW64 420 aaKnown RBP eCLIP18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 ZNF639Q9UID6 485 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 PSME2Q9UL46 239 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 B3GNT3Q9Y2A9 372 aa18.16■□□□□ 0.5
PCDHB18P-201ENST00000524813 LRRC14BA6NHZ5 514 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 H0Y858 1186 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 H0YAE9 185 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 H3BMM5 538 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 AZIN1O14977 448 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 SYNCRIPO60506 623 aaKnown RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 MAFKO60675 156 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 SIX3O95343 332 aaPredicted RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 LINC00032P0C843 101 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 LBPP18428 481 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 SHMT2P34897 504 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 OTUD3Q5T2D3 398 aaPredicted RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 BROXQ5VW32 411 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 PTGR2Q8N8N7 351 aaPredicted RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 RAB2BQ8WUD1 216 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 VPS33AQ96AX1 596 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 ITPKCQ96DU7 683 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 OSMRQ99650 979 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 LHPPQ9H008 270 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 MUC13Q9H3R2 512 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 TUBB1Q9H4B7 451 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 TLR9Q9NR96 1032 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 TMEM30AQ9NV96 361 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 OAS3Q9Y6K5 1087 aaKnown RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 ZFC3H1O60293 1989 aaKnown RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 MATN3O15232 486 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 FGF4P08620 206 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 IGFBP6P24592 240 aaPredicted RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 BFSP2Q13515 415 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 SPATS1Q496A3 300 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 PYCR3Q53H96 274 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 XAF1Q6GPH4 301 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 TAC4Q86UU9 113 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 PTRH1Q86Y79 214 aaKnown RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 RYBPQ8N488 228 aaPredicted RBP18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 ZMIZ2Q8NF64 920 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 OR52K2Q8NGK3 314 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 PPTC7Q8NI37 304 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 SEPT3Q9UH03 358 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 USP22Q9UPT9 525 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 BTRCQ9Y297 605 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 TRIM17Q9Y577 477 aa18.15■□□□□ 0.5
PCDHB18P-201ENST00000524813 DOCK3Q8IZD9 2030 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 DYTNA2CJ06 578 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 UMPSP11172 480 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 NFKB2Q00653 900 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 FAM110CQ1W6H9 321 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 COQ5Q5HYK3 327 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 KANK2Q63ZY3 851 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 RGMBQ6NW40 437 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 OSCP1Q8WVF1 389 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 BIRC7Q96CA5 298 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 NRBF2Q96F24 287 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 CHID1Q9BWS9 393 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 SLC39A8Q9C0K1 460 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 ING2Q9H160 280 aa18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 GPN2Q9H9Y4 310 aaPredicted RBP18.14■□□□□ 0.49
PCDHB18P-201ENST00000524813 POLG2Q9UHN1 485 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms