RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CCL22O00626 93 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 GAPDHSO14556 408 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 PLRG1O43660 514 aaKnown RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 RNASEH2AO75792 299 aaKnown RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 ACADMP11310 421 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 GABRG2P18507 467 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 ITGALP20701 1170 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SLC1A2P43004 574 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SLCO1A2P46721 670 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 LIG3P49916 1009 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 LIMK2P53671 638 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 TAS2R38P59533 333 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 NHLH1Q02575 133 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 CACNG1Q06432 222 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SIGLEC14Q08ET2 396 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 GAS6Q14393 721 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 FASTKD1Q53R41 847 aaKnown RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 RNF187Q5TA31 235 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 GRTP1Q5TC63 336 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 AGBL2Q5U5Z8 902 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 HSD11B1LQ7Z5J1 315 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 PTAR1Q7Z6K3 402 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 TECPR1Q7Z6L1 1165 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 CILP2Q8IUL8 1156 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 CXorf40AQ8TE69 158 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 MTBPQ96DY7 904 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 COQ10AQ96MF6 247 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 TCF12Q99081 682 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 AGAP2Q99490 1192 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 RBBP8Q99708 897 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 MCMBPQ9BTE3 642 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 PREBQ9HCU5 417 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 BPIFA1Q9NP55 256 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 INTS10Q9NVR2 710 aaKnown RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 FBXL12Q9NXK8 326 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SLC17A6Q9P2U8 582 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 CTNNAL1Q9UBT7 734 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SERGEFQ9UGK8 458 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 FBXO5Q9UKT4 447 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 CORO1CQ9ULV4 474 aaPredicted RBP13.01□□□□□ -0.33
CPNE3-205ENST00000522240 NCKAP1Q9Y2A7 1128 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 VPS9D1Q9Y2B5 631 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 TECTAO75443 2155 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 ATG2BQ96BY7 2078 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 TRBV5-4A0A0C4DH59 114 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 TLDC2A0PJX2 215 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 AGAP14A8MT82 685 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 A8MX80 341 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 GOLGA8TH3BQL2 631 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 NEMP1O14524 444 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SNPHO15079 494 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 PFDN6O15212 129 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 CD3EAPO15446 510 aaKnown RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 PIAS1O75925 651 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 KRT37O76014 449 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 KRT38O76015 456 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SRP72O76094 671 aaKnown RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 PRAMEF1O95521 474 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 IGLV3-19P01714 112 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 C6P13671 934 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SPRP35270 261 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 PPARGP37231 505 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 SEMG2Q02383 582 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 NFATC2Q13469 925 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 ITGA9Q13797 1035 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 AGERQ15109 404 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 TMED2Q15363 201 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SMAD1Q15797 465 aaKnown RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 GPR33Q49SQ1 333 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 HSP90B2PQ58FF3 399 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 TNFAIP8L3Q5GJ75 292 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 HENMT1Q5T8I9 393 aaKnown RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 LGSNQ5TDP6 509 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 LYPLAL1Q5VWZ2 237 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 KIAA1161Q6NSJ0 714 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 NEK5Q6P3R8 708 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 KIAA1324Q6UXG2 1013 aaKnown RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 FAM151BQ6UXP7 276 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 CERS6Q6ZMG9 384 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 BMP8AQ7Z5Y6 402 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SNX20Q7Z614 316 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 STRA8Q7Z7C7 330 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SDCCAG8Q86SQ7 713 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 DENND6AQ8IWF6 608 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SPEM1Q8N4L4 309 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 OTUD6BQ8N6M0 293 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 GPR26Q8NDV2 337 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SLC6A17Q9H1V8 727 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 RHOJQ9H4E5 214 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SUDS3Q9H7L9 328 aaPredicted RBP13□□□□□ -0.33
CPNE3-205ENST00000522240 IL26Q9NPH9 171 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 SMOXQ9NWM0 555 aa13□□□□□ -0.33
CPNE3-205ENST00000522240 USP36Q9P275 1121 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms