RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-231	ENST00000521332	CHST15	Q7LFX5	561 aa	Predicted RBP	18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	ATCAY	Q86WG3	371 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	SCAMP4	Q969E2	229 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	ZPBP	Q9BS86	351 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	ABCG8	Q9H221	673 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	TRIT1	Q9H3H1	467 aa	Known RBP	18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	ZWILCH	Q9H900	591 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	TAS2R14	Q9NYV8	317 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	CWC15	Q9P013	229 aa	Known RBP	18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	TP53TG5	Q9Y2B4	290 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	PRKAB1	Q9Y478	270 aa		18.23	■□□□□ 0.51
PTK2-231	ENST00000521332	SNX2	O60749	519 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	PGLS	O95336	258 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	EML2	O95834	649 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	MIP	P30301	263 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	COPB1	P53618	953 aa	Known RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	DPT	Q07507	201 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	ITK	Q08881	620 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	MAMLD1	Q13495	774 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	LRP8	Q14114	963 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	CDKAL1	Q5VV42	579 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	LRRC66	Q68CR7	880 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	WDR74	Q6RFH5	385 aa	Predicted RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	ADAMTSL4	Q6UY14	1074 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	ARHGAP22	Q7Z5H3	698 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	TECPR1	Q7Z6L1	1165 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	NDUFAF2	Q8N183	169 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	CBARP	Q8N350	705 aa	Predicted RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	SFRP1	Q8N474	314 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	ARFGAP1	Q8N6T3	406 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	TEX19	Q8NA77	164 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	ENOX1	Q8TC92	643 aa	Known RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	SPOCK2	Q92563	424 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	SCARF2	Q96GP6	870 aa	Predicted RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	SPRY4	Q9C004	299 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	FBXO8	Q9NRD0	319 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	PDP2	Q9P2J9	529 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	CNOT8	Q9UFF9	292 aa	Known RBP	18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	PCDHB3	Q9Y5E6	796 aa		18.22	■□□□□ 0.51
PTK2-231	ENST00000521332	CLEC18A	A5D8T8	446 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332		H3BRJ5	948 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	SOD1	P00441	154 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	EPHB1	P54762	984 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	MLLT10	P55197	1068 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	UBXN1	Q04323	297 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	FOXM1	Q08050	763 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	CT47A1	Q5JQC4	288 aa	Predicted RBP	18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	TMCO3	Q6UWJ1	677 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	CLEC18B	Q6UXF7	455 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	ATPAF2	Q8N5M1	289 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	CLEC18C	Q8NCF0	446 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	ANKRD20A12P	Q8NF67	263 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	SMIM14	Q96QK8	99 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	AGAP2	Q99490	1192 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	MGME1	Q9BQP7	344 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	FANCL	Q9NW38	375 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	KCNK6	Q9Y257	313 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	TMEM184B	Q9Y519	407 aa	Predicted RBP	18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	RPS6KL1	Q9Y6S9	549 aa		18.21	■□□□□ 0.51
PTK2-231	ENST00000521332	ATP1A1	P05023	1023 aa	Known RBP	18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	CCDC172	P0C7W6	258 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	FER	P16591	822 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	AMPD1	P23109	780 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	ARL4A	P40617	200 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	STAT5A	P42229	794 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	MMP13	P45452	471 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	DPYS	Q14117	519 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	MARC1	Q5VT66	337 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	ESX1	Q8N693	406 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	EXD1	Q8NHP7	514 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	MIB2	Q96AX9	1013 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	SH3KBP1	Q96B97	665 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	PSMG3-AS1	Q96PY0	264 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	MCCC1	Q96RQ3	725 aa	Predicted RBP	18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	RIOK2	Q9BVS4	552 aa	Known RBP	18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	ULBP3	Q9BZM4	244 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	TRIM7	Q9C029	511 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	SARS2	Q9NP81	518 aa	Known RBP	18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	NT5M	Q9NPB1	228 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	ETNK2	Q9NVF9	386 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	TBC1D29	Q9UFV1	150 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	KCTD3	Q9Y597	815 aa		18.2	■□□□□ 0.5
PTK2-231	ENST00000521332	USP9Y	O00507	2555 aa	Predicted RBP	18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	MKRN2OS	H3BPM6	223 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	PEX11B	O96011	259 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	PYGL	P06737	847 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	PDHA1	P08559	390 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	KRT7	P08729	469 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	ACP5	P13686	325 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	DLST	P36957	453 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	HCAR3	P49019	387 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	ZNF135	P52742	658 aa	Predicted RBP	18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	ERV3-1	Q14264	604 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	SMTNL2	Q2TAL5	461 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	PLEKHA7	Q6IQ23	1121 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	SLC9B2	Q86UD5	537 aa		18.19	■□□□□ 0.5
PTK2-231	ENST00000521332	PIH1D2	Q8WWB5	315 aa		18.19	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms