RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 CA5BQ9Y2D0 317 aa17.32■□□□□ 0.36
TRAM1-203ENST00000520700 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
TRAM1-203ENST00000520700 CACNA1EQ15878 2313 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 GLYATL1P3A0A0U1RQE8 302 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 H0Y8X5 98 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 K7ESM1 405 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 FOXD2O60548 495 aaPredicted RBP17.31■□□□□ 0.36
TRAM1-203ENST00000520700 SLU7O95391 586 aaKnown RBP17.31■□□□□ 0.36
TRAM1-203ENST00000520700 PCCBP05166 539 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 THEGLP0DJG4 465 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 NXPH1P58417 271 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 ITGA9Q13797 1035 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 SEPT6Q14141 434 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 PTK2BQ14289 1009 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 PTPRCAPQ14761 206 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 TRADDQ15628 312 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 HIF1AQ16665 826 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 GPR33Q49SQ1 333 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 CCDC38Q502W7 563 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 RAET1GQ6H3X3 334 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 LRRN4CLQ8ND94 238 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 OR13H1Q8NG92 308 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 RUBCNQ92622 972 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 DNAJC1Q96KC8 554 aaKnown RBP17.31■□□□□ 0.36
TRAM1-203ENST00000520700 ZNF778Q96MU6 729 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 AGAP2Q99490 1192 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 EBNA1BP2Q99848 306 aaKnown RBP17.31■□□□□ 0.36
TRAM1-203ENST00000520700 WDR26Q9H7D7 661 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 GDF3Q9NR23 364 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 PHPT1Q9NRX4 125 aaPredicted RBP17.31■□□□□ 0.36
TRAM1-203ENST00000520700 ZDHHC18Q9NUE0 388 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 SMOXQ9NWM0 555 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 SAMD15Q9P1V8 674 aa17.31■□□□□ 0.36
TRAM1-203ENST00000520700 VPS13AQ96RL7 3174 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 SPTY2D1-AS1A0A0U1RR47 76 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 GOLGA8CPA6NN73 597 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 TNFRSF10CO14798 259 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 KHNYNO15037 678 aaKnown RBP17.3■□□□□ 0.36
TRAM1-203ENST00000520700 SRP72O76094 671 aaKnown RBP17.3■□□□□ 0.36
TRAM1-203ENST00000520700 SLC4A1P02730 911 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 KELP23276 732 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 CTSKP43235 329 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 PLTPP55058 493 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 CRADDP78560 199 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 CDK3Q00526 305 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
TRAM1-203ENST00000520700 PEX6Q13608 980 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 NFATC4Q14934 902 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 CHRNA6Q15825 494 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 CSRP2Q16527 193 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 MSS51Q4VC12 460 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 MPP5Q8N3R9 675 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 EIF1ADQ8N9N8 165 aaKnown RBP17.3■□□□□ 0.36
TRAM1-203ENST00000520700 FBXO25Q8TCJ0 367 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 ZNF398Q8TD17 642 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 BTN2A2Q8WVV5 523 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
TRAM1-203ENST00000520700 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 TBATAQ96M53 351 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 MYOCQ99972 504 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 SPATA16Q9BXB7 569 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 FKBPLQ9UIM3 349 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 ANKRD6Q9Y2G4 727 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 TEX264Q9Y6I9 313 aa17.3■□□□□ 0.36
TRAM1-203ENST00000520700 PLXNA2O75051 1894 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 ATXN2Q99700 1313 aaKnown RBP17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 A0A1B0GVT2 93 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 FADS2P1A8MWK0 482 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 CACNB4O00305 520 aaPredicted RBP17.29■□□□□ 0.36
TRAM1-203ENST00000520700 DFNA5O60443 496 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 USP1O94782 785 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TTC4O95801 387 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 SYPP08247 313 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 MYCLP1P12525 358 aaPredicted RBP17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TGM1P22735 817 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 ARSDP51689 593 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 C21orf59P57076 290 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 BNC1Q01954 994 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 NFATC2Q13469 925 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 CUL1Q13616 776 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 ANKRD20A4Q4UJ75 823 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 ATP13A5Q4VNC0 1218 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TRIM61Q5EBN2 209 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 ALS2CLQ60I27 953 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 IL27RAQ6UWB1 636 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 MACC1Q6ZN28 852 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 SNX20Q7Z614 316 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 HEATR4Q86WZ0 1026 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 SPATS2Q86XZ4 545 aaKnown RBP17.29■□□□□ 0.36
TRAM1-203ENST00000520700 IFT20Q8IY31 132 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 SLC22A18ASQ8N1D0 253 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 GLYATL1Q969I3 302 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 HDAC10Q969S8 669 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 STAMBPL1Q96FJ0 436 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 NUSAP1Q9BXS6 441 aaKnown RBP17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TSPYL1Q9H0U9 437 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 NCDNQ9UBB6 729 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 SLC2A6Q9UGQ3 507 aa17.29■□□□□ 0.36
TRAM1-203ENST00000520700 TMPRSS11EQ9UL52 423 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms