RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 ZP1P60852 638 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 PSMC6P62333 389 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 UBXN2AP68543 259 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 MRPS5P82675 430 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 RBP5P82980 135 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 FAM27E3Q08E93 113 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 BFSP1Q12934 665 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 ZSCAN23Q3MJ62 389 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 ERMARDQ5T6L9 678 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 DCAF12L2Q5VW00 463 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 TRILQ7L0X0 811 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 CCDC186Q7Z3E2 898 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 CREBRFQ8IUR6 639 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 WDR63Q8IWG1 891 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 DCP1BQ8IZD4 617 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 OR8H3Q8N146 312 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 TDRD5Q8NAT2 981 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 KDM1BQ8NB78 822 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 POGLUT1Q8NBL1 392 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 BEST2Q8NFU1 509 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 GSDMBQ8TAX9 411 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 NUDCD2Q8WVJ2 157 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 ATOH1Q92858 354 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 LRRC59Q96AG4 307 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 MOAP1Q96BY2 351 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 PGAP3Q96FM1 320 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 SLC41A2Q96JW4 573 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 FAM84BQ96KN1 310 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 HARBI1Q96MB7 349 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 JAKMIP1Q96N16 626 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 OR2A14Q96R47 310 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 WDR77Q9BQA1 342 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 APOL6Q9BWW8 343 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 TM6SF1Q9BZW5 370 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 B3GNT4Q9C0J1 378 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 C2orf40Q9H1Z8 148 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 NDST4Q9H3R1 872 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 GRPEL1Q9HAV7 217 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 MAGEE1Q9HCI5 957 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 BPIFA1Q9NP55 256 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.13□□□□□ -1.753e-6■■■■□ 24.5
SQLE-204ENST00000520493 PSD3Q9NYI0 1048 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 OGFRQ9NZT2 677 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 CPSF2Q9P2I0 782 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 UBA2Q9UBT2 640 aaPredicted RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 CNOT8Q9UFF9 292 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 RASAL2Q9UJF2 1139 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 GTF3C4Q9UKN8 822 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 RAP2CQ9Y3L5 183 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 LSM4Q9Y4Z0 139 aaKnown RBP4.13□□□□□ -1.75
SQLE-204ENST00000520493 MAU2Q9Y6X3 613 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 A3GALT2U3KPV4 340 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 FLT1P17948 1338 aa4.13□□□□□ -1.75
SQLE-204ENST00000520493 OR2A25A4D2G3 310 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 SERINC4A6NH21 518 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 DDTLA6NHG4 134 aaPredicted RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 HSPB2A8KAH6 182 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 BTBD18B2RXH4 712 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 MS4A18H0YCH9 400 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 SLC25A17O43808 307 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 KLK8O60259 260 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PRSS2P07478 247 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 MMP2P08253 660 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 ETFAP13804 333 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 IFNAR1P17181 557 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 CHRNB2P17787 502 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 DDX5P17844 614 aaKnown RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 CD58P19256 250 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 MYF6P23409 242 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 GPTP24298 496 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PON1P27169 355 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 ATP5DP30049 168 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TNFSF8P32971 234 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 SHMT1P34896 483 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PIK3CAP42336 1068 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TNNT3P45378 269 aaPredicted RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 NRIP1P48552 1158 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PCYT1AP49585 367 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 CAMPP49913 170 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PNLIPRP2P54317 469 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 MFAP4P55083 255 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 CRYZQ08257 329 aaKnown RBP4.12□□□□□ -1.75
SQLE-204ENST00000520493 ACSM2AQ08AH3 577 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TRAF2Q12933 501 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 KEAP1Q14145 624 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 COG2Q14746 738 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 NFATC4Q14934 902 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 NAB2Q15742 525 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 HSPB2Q16082 182 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 KRT79Q5XKE5 535 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 ACSM2BQ68CK6 577 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 ADALQ6DHV7 355 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 NADSYN1Q6IA69 706 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 KRT80Q6KB66 452 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 SEPT14Q6ZU15 432 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 DENND5BQ6ZUT9 1274 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 TSPAN33Q86UF1 283 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 THNSL1Q8IYQ7 743 aa4.12□□□□□ -1.75
SQLE-204ENST00000520493 PRR26Q8N8Z3 221 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms