RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 VPS37BQ9H9H4 285 aa14.08□□□□□ -0.16
SDC2-203ENST00000519587 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.16
SDC2-203ENST00000519587 CCDC151A5D8V7 595 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 PRAMEF26H0Y7S4 382 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 FPGTO14772 594 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 PFDN6O15212 129 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 SRP72O76094 671 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 RHOBTB1O94844 696 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 VAPBO95292 243 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 IGHV4-34P06331 123 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CD27P26842 260 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 TEAD1P28347 426 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 MC4RP32245 332 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 DPP6P42658 865 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 GPR1P46091 355 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CACNG1Q06432 222 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 THOC5Q13769 683 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 PTPRCAPQ14761 206 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 IRF4Q15306 451 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 GPR33Q49SQ1 333 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 RAET1GQ6H3X3 334 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 MRNIPQ6NTE8 343 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 ESRP1Q6NXG1 681 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 ZNF449Q6P9G9 518 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CES3Q6UWW8 571 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 NLRP8Q86W28 1048 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 IGDCC3Q8IVU1 814 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 LMNTD2Q8IXW0 634 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 TRAM1L1Q8N609 369 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 FRMD1Q8N878 549 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 ZBTB44Q8NCP5 570 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 GPR26Q8NDV2 337 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 FAM174AQ8TBP5 190 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CDKL2Q92772 493 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 KLK6Q92876 244 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 HDAC10Q969S8 669 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 ULK4Q96C45 1275 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 SGSM3Q96HU1 749 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 ZNF778Q96MU6 729 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 WDR83Q9BRX9 315 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 ABCG8Q9H221 673 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CDC42EP4Q9H3Q1 356 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 IL26Q9NPH9 171 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CATSPERZQ9NTU4 200 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 C20orf96Q9NUD7 363 aaPredicted RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 ARGLU1Q9NWB6 273 aaPredicted RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 SLC2A6Q9UGQ3 507 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CD84Q9UIB8 345 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 CRLS1Q9UJA2 301 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.07□□□□□ -0.16
SDC2-203ENST00000519587 FAM169AQ9Y6X4 670 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 GVINP1Q7Z2Y8 2422 aa14.07□□□□□ -0.16
SDC2-203ENST00000519587 DOCK9Q9BZ29 2069 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 CACNA1BQ00975 2339 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 ZCWPW2A0A1B0GU75 182 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 A0A1W2PPC4 97 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 CCDC162PA2VCL2 907 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 GOLGA8CPA6NN73 597 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 C10orf142B7Z368 130 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 TOR1BO14657 336 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 PAK4O96013 591 aaPredicted RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 PCCBP05166 539 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 FAM153BP0C7A2 387 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 GM2AP17900 193 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 ARSDP51689 593 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 PMS2P54278 862 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 NFATC2Q13469 925 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 FGL2Q14314 439 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 NAA30Q147X3 362 aaPredicted RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 CHRNA6Q15825 494 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 WSCD2Q2TBF2 565 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 FAM153CQ494X1 144 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 FASTKD1Q53R41 847 aaKnown RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 ZRANB3Q5FWF4 1079 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 LYPLAL1Q5VWZ2 237 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 LYSMD4Q5XG99 296 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 PMS2CLQ68D20 193 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 ADAMTSL4Q6UY14 1074 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 CAPN12Q6ZSI9 719 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 SNX20Q7Z614 316 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 SDCCAG8Q86SQ7 713 aaPredicted RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 KCNMB4Q86W47 210 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 PHYKPLQ8IUZ5 450 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 TMEFF1Q8IYR6 380 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 TP53I13Q8NBR0 393 aaPredicted RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 OR4L1Q8NH43 312 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 AENQ8WTP8 325 aaKnown RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 SCAMP4Q969E2 229 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 CAVIN3Q969G5 261 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 CERS2Q96G23 380 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 SERAC1Q96JX3 654 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 TBATAQ96M53 351 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 ZCCHC2Q9C0B9 1178 aaKnown RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 WDR26Q9H7D7 661 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 PPANQ9NQ55 473 aaKnown RBP14.06□□□□□ -0.16
SDC2-203ENST00000519587 NSMCE4AQ9NXX6 385 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 NINJ2Q9NZG7 142 aa14.06□□□□□ -0.16
SDC2-203ENST00000519587 VPS9D1Q9Y2B5 631 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms