RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 SZRD1Q7Z422 152 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 FOXRED2Q8IWF2 684 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 CHERPQ8IWX8 916 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 SRBD1Q8N5C6 995 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 TRPC4APQ8TEL6 797 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 FEM1CQ96JP0 617 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 OR1F2PQ96R84 312 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 NUDT16L1Q9BRJ7 211 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 TMEM39BQ9GZU3 492 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 ADD3Q9UEY8 706 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 OR14J1Q9UGF5 321 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 EXO1Q9UQ84 846 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 TMEM5Q9Y2B1 443 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 R3HDM2Q9Y2K5 976 aaKnown RBP4.49□□□□□ -1.69
SQLE-202ENST00000518604 NFS1Q9Y697 457 aa4.49□□□□□ -1.69
SQLE-202ENST00000518604 ARHGEF40Q8TER5 1519 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 hCG_1807616A0A1W2PRN6 198 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 M0QZ24 198 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SOCS6O14544 535 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SPINT2O43291 252 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SMAD6O43541 496 aaKnown RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 RFPL2O75678 378 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 FCGR1AP12314 374 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 PON1P27169 355 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 ACADLP28330 430 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 HOXA11P31270 313 aaPredicted RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 CLCNKAP51800 687 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 IKQ13123 557 aaPredicted RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 MAD2L1Q13257 205 aaPredicted RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 IRF3Q14653 427 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 ZNF805Q5CZA5 627 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 XKR9Q5GH70 373 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 RARS2Q5T160 578 aaKnown RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 LRIF1Q5T3J3 769 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 KIAA0930Q6ICG6 404 aaPredicted RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 DUS1LQ6P1R4 473 aaKnown RBP4.48□□□□□ -1.69
SQLE-202ENST00000518604 ZDHHC17Q8IUH5 632 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 MCEMP1Q8IX19 187 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 TAGAPQ8N103 731 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 APBB2Q92870 758 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 TAAR8Q969N4 342 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 ELMOD3Q96FG2 381 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 CALML4Q96GE6 196 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 PLK3Q9H4B4 646 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SETD4Q9NVD3 440 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 MTMR10Q9NXD2 777 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SELENONQ9NZV5 590 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 TINAGQ9UJW2 476 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 NENFQ9UMX5 172 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 CMAHPQ9Y471 501 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 TNFRSF18Q9Y5U5 241 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 SNX9Q9Y5X1 595 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 CLIC4Q9Y696 253 aa4.48□□□□□ -1.69
SQLE-202ENST00000518604 PASKQ96RG2 1323 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 ATP2A1O14983 1001 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 SMAD9O15198 467 aaKnown RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 OGG1O15527 345 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 EGFP01133 1207 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 DAOP14920 347 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 ZNF12P17014 697 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 THBS3P49746 956 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 HTR6P50406 440 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 TUBA1BP68363 451 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 MRPS5P82675 430 aaKnown RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 SREBF2Q12772 1141 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 DHX34Q14147 1143 aaKnown RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 MYLK3Q32MK0 819 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 GLCCI1Q86VQ1 547 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 SAMD14Q8IZD0 417 aaPredicted RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 BEST3Q8N1M1 668 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 PGBD5Q8N414 524 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 ZNF114Q8NC26 417 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 HJURPQ8NCD3 748 aaPredicted RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 OR8K5Q8NH50 307 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 DNAAF4Q8WXU2 420 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 SAT2Q96F10 170 aaPredicted RBP4.47□□□□□ -1.69
SQLE-202ENST00000518604 NUDCD1Q96RS6 583 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 EPB41L5Q9HCM4 733 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 SMARCAL1Q9NZC9 954 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 SNX8Q9Y5X2 465 aa4.47□□□□□ -1.69
SQLE-202ENST00000518604 B4DLN1 442 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 MAP2K7O14733 419 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 KCNN4O15554 427 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 TMCC2O75069 709 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 TPPPO94811 219 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 NGFRP08138 427 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 ACAA1P09110 424 aaPredicted RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 T-ENOLP0DO92 83 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 ANXA7P20073 488 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 SSTR2P30874 369 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 GPR143P51810 404 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 MRPL12P52815 198 aaKnown RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 NFATC4Q14934 902 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 WDR73Q6P4I2 378 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 BRAT1Q6PJG6 821 aa4.46□□□□□ -1.7
SQLE-202ENST00000518604 CCNI2Q6ZMN8 369 aaPredicted RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 SPATA2LQ8IUW3 424 aaPredicted RBP4.46□□□□□ -1.7
SQLE-202ENST00000518604 ARID3BQ8IVW6 561 aaPredicted RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms