RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 XYLBO75191 536 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 TAF6P49848 677 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 TTLL4Q14679 1199 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 MARCH8Q5T0T0 291 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 R3HCC1LQ7Z5L2 792 aaKnown RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 KIAA2013Q8IYS2 634 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 DCP1BQ8IZD4 617 aaKnown RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 PTGR2Q8N8N7 351 aaPredicted RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 RAB2BQ8WUD1 216 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 BIRC7Q96CA5 298 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 L3HYPDHQ96EM0 354 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 CNDP2Q96KP4 475 aaKnown RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 ALPK1Q96QP1 1244 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 TRMOQ9BU70 441 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 SDR39U1Q9NRG7 319 aaPredicted RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 NDFIP2Q9NV92 336 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 WARS2Q9UGM6 360 aaKnown RBP12.34□□□□□ -0.43
PCM1-203ENST00000517545 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
PCM1-203ENST00000517545 TOR1BO14657 336 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ANXA9O76027 345 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 PCNAP12004 261 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 HRH2P25021 359 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 AIF1P55008 147 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 RPS3AP61247 264 aaKnown RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 HERVK_113P63132 956 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 IMPG1Q17R60 797 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 BROXQ5VW32 411 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 BLOC1S3Q6QNY0 202 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ARHGAP12Q8IWW6 846 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 TBC1D21Q8IYX1 336 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ATPAF2Q8N5M1 289 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 GOLM1Q8NBJ4 401 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 PDZD8Q8NEN9 1154 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 SLC22A17Q8WUG5 538 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 TSGA13Q96PP4 275 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 DGCR6LQ9BY27 220 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 NTN4Q9HB63 628 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 POLR3BQ9NW08 1133 aaPredicted RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 ZNF639Q9UID6 485 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 CRYL1Q9Y2S2 319 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 PCDHGA11Q9Y5H2 935 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 DNAH12Q6ZR08 3092 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 UBXN8O00124 270 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 JUNBP17275 347 aaPredicted RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 LEPRP48357 1165 aaKnown RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 RAD23AP54725 363 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 LILRA4P59901 499 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 MTA1Q13330 715 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 OXA1LQ15070 435 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ZMIZ2Q8NF64 920 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 PNPT1Q8TCS8 783 aaKnown RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 RNF34Q969K3 372 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 SH3YL1Q96HL8 342 aaPredicted RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 SMOQ99835 787 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 YTHDF1Q9BYJ9 559 aaKnown RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 GPN2Q9H9Y4 310 aaPredicted RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 INTS7Q9NVH2 962 aaKnown RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 AZIN1O14977 448 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 CLCN5P51795 746 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 VGLL4Q14135 290 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 PFKFB4Q16877 469 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 RANBP10Q6VN20 620 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ITPKCQ96DU7 683 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 ZNF560Q96MR9 790 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 OSMRQ99650 979 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 FUNDC2Q9BWH2 189 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 CRTAC1Q9NQ79 661 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 RBM22Q9NW64 420 aaKnown RBP eCLIP12.33□□□□□ -0.44
PCM1-203ENST00000517545 MARCH4Q9P2E8 410 aaPredicted RBP12.33□□□□□ -0.44
PCM1-203ENST00000517545 B3GNT3Q9Y2A9 372 aa12.33□□□□□ -0.44
PCM1-203ENST00000517545 MAFKO60675 156 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ABCB7O75027 752 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 BCAS1O75363 584 aaPredicted RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 HTR1AP08908 422 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 CRHBPP24387 322 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 HPCAL1P37235 193 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ARSDP51689 593 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ARSFP54793 590 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 OR4D2P58180 307 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 IFITM3Q01628 133 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ARMCX2Q7L311 632 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 SPARTQ8N0X7 666 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 CADM3Q8N126 398 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 PAPD5Q8NDF8 572 aaKnown RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 FKBP10Q96AY3 582 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 MPHOSPH6Q99547 160 aaKnown RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 PCDH12Q9NPG4 1184 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 RBMX2Q9Y388 322 aaKnown RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 TIMM22Q9Y584 194 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 UPK1AO00322 258 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 AQP9O43315 295 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 LBPP18428 481 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 EEF1DP29692 281 aaKnown RBP12.32□□□□□ -0.44
PCM1-203ENST00000517545 IST1P53990 364 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 GEMP55040 296 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 SLC14A2Q15849 920 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 ANKRD34AQ69YU3 496 aa12.32□□□□□ -0.44
PCM1-203ENST00000517545 PM20D1Q6GTS8 502 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms