RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 HDAC10Q969S8 669 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 PLEKHG4BQ96PX9 1271 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 LGR4Q9BXB1 951 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 TXLNGYQ9BZA5 131 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 PHACTR1Q9C0D0 580 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 FAM83DQ9H4H8 585 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 UGT1A7Q9HAW7 530 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 UGT1A10Q9HAW8 530 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 UGT1A8Q9HAW9 530 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 TM9SF3Q9HD45 589 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 FAM86C1Q9NVL1 165 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 PKD2L2Q9NZM6 624 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 IL1RAPL1Q9NZN1 696 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 MARCH4Q9P2E8 410 aaPredicted RBP9.84□□□□□ -0.83
CLN8-202ENST00000517514 RAPGEFL1Q9UHV5 662 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 PILRBQ9UKJ0 227 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 PNMA8BQ9ULN7 279 aaPredicted RBP9.84□□□□□ -0.83
CLN8-202ENST00000517514 CHMP2BQ9UQN3 213 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 DMTF1Q9Y222 760 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 HS3ST3A1Q9Y663 406 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 CACNA1EQ15878 2313 aa9.84□□□□□ -0.83
CLN8-202ENST00000517514 GPR179Q6PRD1 2367 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 TRBV5-4A0A0C4DH59 114 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PRAMEF26H0Y7S4 382 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 NDC80O14777 642 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 EIF3HO15372 352 aaKnown RBP eCLIP9.83□□□□□ -0.84
CLN8-202ENST00000517514 FUCA1P04066 466 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PCCBP05166 539 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 F7P08709 466 aaPredicted RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 NFKBIAP25963 317 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 TEAD1P28347 426 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SPAM1P38567 509 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 NBL1P41271 181 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PFN3P60673 137 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SGCGQ13326 291 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 INPP5AQ14642 412 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 ATP13A5Q4VNC0 1218 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 DNAJC21Q5F1R6 531 aaKnown RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 ARMC3Q5W041 872 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 LYSMD4Q5XG99 296 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PSAPL1Q6NUJ1 521 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 TRMT10BQ6PF06 316 aaKnown RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 FAM151BQ6UXP7 276 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 CCNI2Q6ZMN8 369 aaPredicted RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 UNC5AQ6ZN44 842 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 CEP68Q76N32 757 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PDIK1LQ8N165 341 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SLC22A18ASQ8N1D0 253 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FBXO36Q8NEA4 188 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 DTX3LQ8TDB6 740 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SNX19Q92543 992 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FOXJ1Q92949 421 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PEX13Q92968 403 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 AP2M1Q96CW1 435 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 LRRC39Q96DD0 335 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 STAMBPL1Q96FJ0 436 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 COX14Q96I36 57 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SERAC1Q96JX3 654 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PRRX2Q99811 253 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 TEX101Q9BY14 249 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FAM129AQ9BZQ8 928 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FOXP3Q9BZS1 431 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FAM96AQ9H5X1 160 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 SAYSD1Q9NPB0 183 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 FNDC3AQ9Y2H6 1198 aaKnown RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 OR1A2Q9Y585 309 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 PCYT1BQ9Y5K3 369 aaPredicted RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 MAD1L1Q9Y6D9 718 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 OAS3Q9Y6K5 1087 aaKnown RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 FAM169AQ9Y6X4 670 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 TDRD6O60522 2096 aaKnown RBP9.83□□□□□ -0.84
CLN8-202ENST00000517514 PIKFYVEQ9Y2I7 2098 aa9.83□□□□□ -0.84
CLN8-202ENST00000517514 GLYATL1P3A0A0U1RQE8 302 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 MAGEB16A2A368 324 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 MEI4A8MW99 385 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PATE3B3GLJ2 98 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 GOLGA8KD6RF30 607 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 GOLGA8TH3BQL2 631 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 SRP72O76094 671 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 USP1O94782 785 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 RHOBTB1O94844 696 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 EPN2O95208 641 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PRAMEF1O95521 474 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 GOT2P00505 430 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 PGAM1P18669 254 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 AKT2P31751 481 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 MC4RP32245 332 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 NUDT1P36639 197 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 MAGEA4P43358 317 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PTPN5P54829 565 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 PDE1BQ01064 536 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 HLTFQ14527 1009 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLN8-202ENST00000517514 CRYMQ14894 314 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 SMAD1Q15797 465 aaKnown RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 SKIDA1Q1XH10 827 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ZNF648Q5T619 568 aaPredicted RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 KIAA0930Q6ICG6 404 aaPredicted RBP9.82□□□□□ -0.84
CLN8-202ENST00000517514 WDR93Q6P2C0 686 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 ADAMTSL4Q6UY14 1074 aa9.82□□□□□ -0.84
CLN8-202ENST00000517514 KYAT3Q6YP21 454 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms