RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PSMA7O14818 248 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 WDR46O15213 610 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 STX6O43752 255 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SYNCRIPO60506 623 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 RAMP2O60895 175 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 FZD7O75084 574 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CREG1O75629 220 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 GH2P01242 217 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 VPREB1P12018 145 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PPP3CCP48454 512 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SELENOVP59797 346 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SORDQ00796 357 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PPARDQ03181 441 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 DPTQ07507 201 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 ITGADQ13349 1161 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 LAMB3Q13751 1172 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 INPP5JQ15735 1006 aaPredicted RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 EPHA10Q5JZY3 1008 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 Q5PR19 223 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 TMEM198Q66K66 360 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CES5AQ6NT32 575 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PAPD4Q6PIY7 484 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PET117Q6UWS5 81 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 TPRG1Q6ZUI0 275 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 IRF2BP2Q7Z5L9 587 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 HAPLN4Q86UW8 402 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CEP97Q8IW35 865 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 FAM217AQ8IXS0 508 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 MB21D2Q8IYB1 491 aaPredicted RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CCDC13Q8IYE1 715 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SPATA6LQ8N4H0 392 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SLC38A9Q8NBW4 561 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 ENGASEQ8NFI3 743 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 OR1J2Q8NGS2 313 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 GOT1L1Q8NHS2 421 aaPredicted RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CFAP61Q8NHU2 1237 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 COQ8BQ96D53 544 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 NEK1Q96PY6 1258 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SLC22A12Q96S37 553 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 GAD1Q99259 594 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 GPATCH1Q9BRR8 931 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 MLPHQ9BV36 600 aaPredicted RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SCNM1Q9BWG6 230 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 TMEM39BQ9GZU3 492 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 LHPPQ9H008 270 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PPIL3Q9H2H8 161 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 KCNN2Q9H2S1 579 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 KCNK15Q9H427 330 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 RETREG1Q9H6L5 497 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PPP1R3EQ9H7J1 279 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CLK4Q9HAZ1 481 aaKnown RBP3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 TRPV4Q9HBA0 871 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 PFDN4Q9NQP4 134 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 MRGBPQ9NV56 204 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 NME7Q9Y5B8 376 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 LIPGQ9Y5X9 500 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 SQORQ9Y6N5 450 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZMYM2Q9UBW7 1377 aa3.35□□□□□ -1.87
RNU6-840P-201ENST00000517275 CPED1A4D0V7 1026 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LRRC3CA6NJW4 275 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 STMND1H3BQB6 276 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 M0QZ24 198 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PPP6CO00743 305 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 RGS11O94810 467 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 CYC1P08574 325 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LINGO3P0C6S8 592 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 ERCC2P18074 760 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 CASTP20810 708 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 SP100P23497 879 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 OAS2P29728 719 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 TCF7P36402 384 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 TNNT3P45378 269 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 NPY4RP50391 375 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LIMK1P53667 647 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 POLGP54098 1239 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 GRIK2Q13002 908 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 GAGE2BQ13066 116 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 NEDD9Q14511 834 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 DECR1Q16698 335 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 MYLK3Q32MK0 819 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 GAGE2EQ4V326 116 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 GAGE2AQ6NT46 116 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PARM1Q6UWI2 310 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 SUSD1Q6UWL2 747 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PIP4P1Q86T03 277 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LDB1Q86U70 411 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 NRROSQ86YC3 692 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 AADATQ8N5Z0 425 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 PAPD5Q8NDF8 572 aaKnown RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 OR8K5Q8NH50 307 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 BBS10Q8TAM1 723 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 DPF1Q92782 380 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 ERGIC1Q969X5 290 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 LINC00615Q96LM1 132 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZNF830Q96NB3 372 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 ZNF570Q96NI8 536 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 EGFL8Q99944 293 aa3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 CITED2Q99967 270 aaPredicted RBP3.34□□□□□ -1.87
RNU6-840P-201ENST00000517275 HAUS8Q9BT25 410 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms