RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 XKR5Q6UX68 686 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 LIPIQ6XZB0 460 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 ZSWIM9Q86XI8 627 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 DTWD1Q8N5C7 304 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 EXTL1Q92935 676 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 EIF3CQ99613 913 aaKnown RBP8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 AGPAT1Q99943 283 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 TMEM168Q9H0V1 697 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 DHX35Q9H5Z1 703 aaKnown RBP8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 SIK3Q9Y2K2 1263 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 RNF215Q9Y6U7 377 aa8.91□□□□□ -0.98
CDC42SE2-212ENST00000515533 PRAMEF33A0A0G2JMD5 474 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 TCRBV5S1A1TA0A578 114 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PRSS38A1L453 326 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RHPN2P1A8MT19 583 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 A8MX80 341 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 DFFAO00273 331 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 TNFRSF10CO14798 259 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 TEX33O43247 280 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 NOBOXO60393 691 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PRAMEF10O60809 474 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RNF8O76064 485 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 WISP1O95388 367 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 CPNE6O95741 557 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 HOXC4P09017 264 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 SFTPCP11686 197 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PSMA2P25787 234 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 CD82P27701 267 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RGRP47804 291 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 CSNK1DP48730 415 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 SCNN1BP51168 640 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 COPB1P53618 953 aaKnown RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 UBXN1Q04323 297 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 ILF3Q12906 894 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RALGDSQ12967 914 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 HLTFQ14527 1009 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RFTN1Q14699 578 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PPP6R3Q5H9R7 873 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 KCTD16Q68DU8 428 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PPP1R2P3Q6NXS1 205 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 OGFOD3Q6PK18 319 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 DPPA4Q7L190 304 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PIM3Q86V86 326 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PDCD6IPQ8WUM4 868 aaKnown RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 USP7Q93009 1102 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 ECHDC3Q96DC8 303 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 NUS1Q96E22 293 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 GSDMCQ9BYG8 508 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 GSX2Q9BZM3 304 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 SLC39A8Q9C0K1 460 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 SUDS3Q9H7L9 328 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 CARS2Q9HA77 564 aaKnown RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RDH14Q9HBH5 336 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PHPT1Q9NRX4 125 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 PARVAQ9NVD7 372 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 FANCLQ9NW38 375 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 GPATCH2LQ9NWQ4 482 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 KCTD5Q9NXV2 234 aa8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE2-212ENST00000515533 RP1L1Q8IWN7 2480 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE2-212ENST00000515533 FLNCQ14315 2725 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 A0A1W2PQ67 120 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 A0A1W2PQC6 194 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 GOLGA6CA6NDK9 693 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 GOLGA6BA6NDN3 693 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 LGALS16A8MUM7 142 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 GOLGA6DP0CG33 693 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 MYCLP1P12525 358 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 CCNB1P14635 433 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 FERP16591 822 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ERCC2P18074 760 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 CDK11BP21127 795 aaKnown RBP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 VAMP1P23763 118 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ALDH4A1P30038 563 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 TRIM23P36406 574 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ETV5P41161 510 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 CSRP3P50461 194 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 RENBPP51606 427 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 AP1S1P61966 158 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 OGDHQ02218 1023 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ZFP36L1Q07352 338 aaKnown RBP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 IL10RBQ08334 325 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 NSUN2Q08J23 767 aaKnown RBP eCLIP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 SRSF6Q13247 344 aaKnown RBP8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 PEX6Q13608 980 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ZNF235Q14590 738 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 LINC00303Q3SY05 128 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 AMZ1Q400G9 498 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ERMARDQ5T6L9 678 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 AFMIDQ63HM1 303 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 DENND2CQ68D51 928 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 ACAD10Q6JQN1 1059 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 PNCKQ6P2M8 343 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 RFX8Q6ZV50 586 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 VASH2Q86V25 355 aa8.89□□□□□ -0.99
CDC42SE2-212ENST00000515533 HEATR4Q86WZ0 1026 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms