RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 LBRQ14739 615 aaKnown RBP20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 CLEC16AQ2KHT3 1053 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 PHF13Q86YI8 300 aaPredicted RBP20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 GALNT13Q8IUC8 556 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 EFCAB3Q8N7B9 438 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 MLKLQ8NB16 471 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 SCAMP4Q969E2 229 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 SMIM14Q96QK8 99 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 PSKH2Q96QS6 385 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 AGAP2Q99490 1192 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 CNPY3Q9BT09 278 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 ULBP3Q9BZM4 244 aa20.18■□□□□ 0.82
SQSTM1-215ENST00000514093 CDC14CA4D256 554 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 RFPL1O75677 317 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 DNAJB5O75953 348 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 ERCC2P18074 760 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 TEAD1P28347 426 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 RENBPP51606 427 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 TRAF2Q12933 501 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 TECPR1Q7Z6L1 1165 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 GALNT6Q8NCL4 622 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 GALNT11Q8NCW6 608 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 CPT1CQ8TCG5 803 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 AP2M1Q96CW1 435 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 TBC1D10AQ9BXI6 508 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 ABCG8Q9H221 673 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 NOD2Q9HC29 1040 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 SAMSN1Q9NSI8 373 aaKnown RBP20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 SEPT11Q9NVA2 429 aaKnown RBP20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 TBC1D29Q9UFV1 150 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 ZNHIT2Q9UHR6 403 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 PHTF1Q9UMS5 762 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 POLHQ9Y253 713 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 CACNA1DQ01668 2161 aa20.17■□□□□ 0.82
SQSTM1-215ENST00000514093 ITPR2Q14571 2701 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 ANKRD62A6NC57 917 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 EPHB6O15197 1021 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 INPP4BO15327 924 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 SOCS5O75159 536 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 ASMTLO95671 621 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 COL8A1P27658 744 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 HTR7P34969 479 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 DPTQ07507 201 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 MAP7Q14244 749 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 C6orf15Q6UXA7 325 aaPredicted RBP20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 RFX8Q6ZV50 586 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 MON1BQ7L1V2 547 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 CHST15Q7LFX5 561 aaPredicted RBP20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 PGBD5Q8N414 524 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 SPOCK2Q92563 424 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 ELMO2Q96JJ3 720 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 KCTD15Q96SI1 283 aaPredicted RBP20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 SARS2Q9NP81 518 aaKnown RBP20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 SIDT1Q9NXL6 827 aaKnown RBP20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 TAB2Q9NYJ8 693 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 PCSK1NQ9UHG2 260 aa20.16■□□□□ 0.82
SQSTM1-215ENST00000514093 PSMD11O00231 422 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 SNX2O60749 519 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 GFERP55789 205 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 JAM2P57087 298 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 MAXP61244 160 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 ZNF235Q14590 738 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 PPP1R15BQ5SWA1 713 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 TMCO4Q5TGY1 634 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 ZNF787Q6DD87 383 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 DCUN1D2Q6PH85 259 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 IYDQ6PHW0 289 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 ADAMTSL4Q6UY14 1074 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 LZTR1Q8N653 840 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 SCRN2Q96FV2 425 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 TWSG1Q9GZX9 223 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 FAM207AQ9NSI2 230 aaPredicted RBP20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 KCNK6Q9Y257 313 aa20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 OAS3Q9Y6K5 1087 aaKnown RBP20.15■□□□□ 0.82
SQSTM1-215ENST00000514093 TEP1Q99973 2627 aaKnown RBP20.14■□□□□ 0.82
SQSTM1-215ENST00000514093 A0A1W2PQ67 120 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 PIPSLA2A3N6 862 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 ATP1A1P05023 1023 aaKnown RBP20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 PMS2P54278 862 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 SH3BP2P78314 561 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 LRP8Q14114 963 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 PPP6R3Q5H9R7 873 aaPredicted RBP20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 NUDCD1Q96RS6 583 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 PEBP4Q96S96 227 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 TRIM55Q9BYV6 548 aa20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 STN1Q9H668 368 aaKnown RBP20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 TNRC6AQ8NDV7 1962 aaKnown RBP20.14■□□□□ 0.81
SQSTM1-215ENST00000514093 KIAA0754O94854 1291 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 PGLSO95336 258 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 NFKBIAP25963 317 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 SEPHS1P49903 392 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 NADK2Q4G0N4 442 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 ERMARDQ5T6L9 678 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 LRRC66Q68CR7 880 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 SLC9B2Q86UD5 537 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 ARFGAP1Q8N6T3 406 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 SH3KBP1Q96B97 665 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 STAMBPL1Q96FJ0 436 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 OR6C1Q96RD1 312 aa20.13■□□□□ 0.81
SQSTM1-215ENST00000514093 MCCC1Q96RQ3 725 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms