RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 AGAP14A8MT82 685 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 PRAMEF1O95521 474 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 PAK4O96013 591 aaPredicted RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 MC4RP32245 332 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 FOXN2P32314 431 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 FNTBP49356 437 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 MGAT5Q09328 741 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 SGCGQ13326 291 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 CHRNA6Q15825 494 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 ALS2CLQ60I27 953 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 KIAA0895LQ68EN5 471 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 NEPROQ6NW34 567 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 FAM151BQ6UXP7 276 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 SLC36A4Q6YBV0 504 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 MICALCLQ6ZW33 695 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 PTAR1Q7Z6K3 402 aaPredicted RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 KCNMB4Q86W47 210 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 LONP2Q86WA8 852 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 GPR150Q8NGU9 434 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 CALML6Q8TD86 181 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 KLK6Q92876 244 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 LENG8Q96PV6 779 aaPredicted RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 ZSCAN5AQ9BUG6 496 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 RIOK2Q9BVS4 552 aaKnown RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 GPR174Q9BXC1 333 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 C1QTNF7Q9BXJ2 289 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 PCED1AQ9H1Q7 454 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 FNDC3AQ9Y2H6 1198 aaKnown RBP12.47□□□□□ -0.41
PDPN-210ENST00000513143 SLC30A1Q9Y6M5 507 aa12.47□□□□□ -0.41
PDPN-210ENST00000513143 THADAQ6YHU6 1953 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 FAM86C2PA6NEL3 165 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 FAM159BA6NKW6 160 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 PRR33A8MZF0 331 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 GOLGA8KD6RF30 607 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 GOLGA8TH3BQL2 631 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 CD3EAPO15446 510 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 GPR37L1O60883 481 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 NDUFS2O75306 463 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 IGHV4-34P06331 123 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 MAT2AP31153 395 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 CACNG1Q06432 222 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 NFATC2Q13469 925 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 THOC5Q13769 683 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 ITGA9Q13797 1035 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 WSCD2Q2TBF2 565 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 ZNF528Q3MIS6 628 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 GPR33Q49SQ1 333 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 FASTKD1Q53R41 847 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 HSP90AA5PQ58FG0 334 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 TEDDM1Q5T9Z0 273 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 SNX20Q7Z614 316 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 CNTN4Q8IWV2 1026 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 LMNTD2Q8IXW0 634 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 TRAM1L1Q8N609 369 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 TP53I13Q8NBR0 393 aaPredicted RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 CADM4Q8NFZ8 388 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 UHMK1Q8TAS1 419 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 ZNF398Q8TD17 642 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 ANKRD7Q92527 254 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 CDKL2Q92772 493 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 NELL1Q92832 810 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 CENPTQ96BT3 561 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 CYTH2Q99418 400 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 KLF6Q99612 283 aaPredicted RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 FAM167BQ9BTA0 163 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 SPATA16Q9BXB7 569 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 FAM126AQ9BYI3 521 aaPredicted RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 ACSS3Q9H6R3 686 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 ASB8Q9H765 288 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 PPANQ9NQ55 473 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 SMYD2Q9NRG4 433 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 IARS2Q9NSE4 1012 aaKnown RBP12.46□□□□□ -0.41
PDPN-210ENST00000513143 INVSQ9Y283 1065 aa12.46□□□□□ -0.41
PDPN-210ENST00000513143 METTL12A8MUP2 240 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 FADS2P1A8MWK0 482 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 CXorf49A8MYA2 514 aaPredicted RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 RAD51BO15315 384 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 SLC31A1O15431 190 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A9O60656 530 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 SOD1P00441 154 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 PYGLP06737 847 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 NUDT17P0C025 328 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A6P19224 532 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 ITGALP20701 1170 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A1P22309 533 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A4P22310 534 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 TEAD1P28347 426 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A3P35503 534 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 UGT1A5P35504 534 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 NUDT1P36639 197 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 LRRC14Q15048 493 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 SMAD1Q15797 465 aaKnown RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 KBTBD12Q3ZCT8 623 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 ATP13A5Q4VNC0 1218 aa12.45□□□□□ -0.42
PDPN-210ENST00000513143 SETMARQ53H47 684 aaPredicted RBP12.45□□□□□ -0.42
PDPN-210ENST00000513143 ZRANB3Q5FWF4 1079 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms