RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, human

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD1-208	ENST00000512392	AIF1	P55008	147 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	NRG3	P56975	720 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	GNAI1	P63096	354 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MRPS15	P82914	257 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SRSF5	Q13243	272 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	DLG2	Q15700	870 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	P3H1	Q32P28	736 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ZIK1	Q3SY52	487 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392		Q3ZCU0	254 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	IFI44L	Q53G44	452 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	FAM173B	Q6P4H8	233 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TMEM81	Q6P7N7	255 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TMEM88	Q6PEY1	159 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TSSK4	Q6SA08	328 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CFAP77	Q6ZQR2	320 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SEM1	Q6ZVN7	128 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TP53INP2	Q8IXH6	220 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	EFCAB13	Q8IY85	973 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CFAP206	Q8IYR0	622 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PM20D2	Q8IYS1	436 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	LILRA2	Q8N149	483 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	LILRA3	Q8N6C8	439 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	RNF169	Q8NCN4	708 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	OR7D4	Q8NG98	312 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PPP2R3C	Q969Q6	453 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	KIAA1143	Q96AT1	154 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	RNF31	Q96EP0	1072 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MSANTD3	Q96H12	275 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ART5	Q96L15	291 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PANX2	Q96RD6	677 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MESP1	Q9BRJ9	268 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	VCX3B	Q9H321	246 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TMLHE	Q9NVH6	421 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	FAM118A	Q9NWS6	357 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ERAP1	Q9NZ08	941 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TRPM5	Q9NZQ8	1165 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SUFU	Q9UMX1	484 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	VPS4A	Q9UN37	437 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CDY1	Q9Y6F8	540 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	FAM230A	A0A1W2PPH8	454 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	AQP7P3	A6NL99	342 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392		E9PI62	339 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	HS3ST1	O14792	307 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	AKR7A2	O43488	359 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CBFA2T3	O75081	653 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ECI2	O75521	394 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CSTA	P01040	98 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	RALB	P11234	206 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	DRD5	P21918	477 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	DNASE1	P24855	282 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PON1	P27169	355 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ARL1	P40616	181 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CDKN1B	P46527	198 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SERPINH1	P50454	418 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PTTG1IP	P53801	180 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	GP2	P55259	537 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PDZK1IP1	Q13113	114 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	XRCC4	Q13426	336 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PTCHD3	Q3KNS1	767 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ZSCAN23	Q3MJ62	389 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	KRT79	Q5XKE5	535 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	HMBOX1	Q6NT76	420 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TMEM182	Q6ZP80	229 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	RNF10	Q8N5U6	811 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	NAT16	Q8N8M0	369 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	HJURP	Q8NCD3	748 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	CLEC4C	Q8WTT0	213 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	DNAJA4	Q8WW22	397 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	KAT2B	Q92831	832 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ZNF707	Q96C28	371 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SMC6	Q96SB8	1091 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	NAP1L3	Q99457	506 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	PLIN2	Q99541	437 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MTG1	Q9BT17	334 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	IFIH1	Q9BYX4	1025 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	EXO5	Q9H790	373 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	SYNPO2L	Q9H987	977 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	LY9	Q9HBG7	655 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	GPN1	Q9HCN4	374 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	ETNK2	Q9NVF9	386 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	BARHL2	Q9NY43	387 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MTRF1L	Q9UGC7	380 aa	Known RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	TRPC5	Q9UL62	973 aa	Predicted RBP	6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	OSGIN2	Q9Y236	505 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	MAB21L2	Q9Y586	359 aa		6.24	□□□□□ -1.41
CHD1-208	ENST00000512392	UBE4B	O95155	1302 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	AOX1	Q06278	1338 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392		A0A1B0GTQ1	180 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392		A0A1W2PRX2	142 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	TMEM82	A0PJX8	343 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	ZNF785	A8K8V0	405 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	XPO1	O14980	1071 aa	Known RBP	6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	HS6ST1	O60243	411 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	SELENOF	O60613	162 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	TOM1L1	O75674	476 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	KLHL18	O94889	574 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	ESR1	P03372	595 aa		6.23	□□□□□ -1.41
CHD1-208	ENST00000512392	IVL	P07476	585 aa		6.23	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms